Detail



ID : Ahg473393

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473393|fgenesh2_kg.1__3347__AT1G32100.1
Sequence
AAAAAATGGG AGAGGGCAAA CGCACCGAGA AAACGCGCGT TTTGGTGGTG GGAGCGACTG GGTACATAGG GAAGAGGATA GTAAGGGCGT GTTTGGCTGA AGGTCACGAG ACTTATGTTT TGCAGCGGCC AGAGATTGGT CTCGATGTCG AGAAAGTCCA ACTCCTTCTC TCTTTCAAGA AACTCGGCGC ACGAATCGTT GAAGGTTCTT TCTCCGACCA CCAAAGCCTC GTCTCTGCCG TGAAACTTGT TGACGTCGTT GTCTCCGCCA TGTCCGGCGT TCACTTCCGT AGCCATAACA TCCTTGTTCA GCTCAAGCTT GTCGAAGCCA TCAAAGAGGC TGGTAACGTC AAGCGGTTTT TACCATCTGA ATTTGGTATG GATCCACCGC GTATGGGACA TGCGCTACCA CCAGGAAGAG AAACCTTCGA CCAGAAAATG GAAGTGCGTC AGGCGATAGA GGCTGCCGGA ATTCCATACA CTTACATTGT GGGTGCTTGC TTTGCCGCCT ACTTCGCCGG AAACTTATCT CAGATGGTAA CTTTACTTCC TCCCAAAGAA AAAGTTAATA TTTATGGTGA CGGAAATGTA AAAGTTGTGT TCGCGGATGA AGATGATATC GCAAAATACA CCGCAAAGAC GTTAAACGAT CCGCGGACAT TAAACAAAAC CGTGAATATA AGACCTCCCG ACAACGTTCT CACTCAGATG GAATTAGTTC AGATGTGGGA AAAGCTAACC GGAAAAGAAT TGGAGAAAAC AAATATTGCT GCAGAAGACT TCCTTGCCAA CATTGAACAA ATGGAGATTC CACACCAAGC GGGGATAGGA CATTTCTATC ACATTTTCTA CGAAGGATGT CTCACTGATC ACGATGTCGG AGAAGACGAA GAAGCTTCTA GTCTTTATCC TGACGTCAAG TACAAACGCA TGGATGATTA CTTAAGAATG TTCCTTTAAA TACTCGTATC AAAAGTTTGA TGTTTTATAT TCATATATGT TCTGCTATAC AAATTTAAAA ATATATTCTT CATGTAATAA AAAATATTAT CTTTTGTT 
Length1058
Protein Sequence
Protein Residue
Map Locationscaffold_1: 13845090.. 13846837
Download Sequence
A.thaliana
AGI-codeAT1G32100.1
Descriptionpinoresinol reductase 1
TAIR curator summaryEncodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.
Alias[ATPRR1][PRR1][pinoresinol reductase 1]
Gene coexpression
MR
MR Locus Description
12.9228 Ahg480276 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
14.8324 Ahg938360 Eukaryotic aspartyl protease family protein
18.8414 Ahg483654 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
19.2094 Ahg473169 GDSL-like Lipase/Acylhydrolase superfamily protein
23.2379 Ahg473203 chlorophyll A/B-binding protein 2
27.1109 Ahg482197 glycine-rich protein 23
31.4643 Ahg473204 chlorophyll A/B binding protein 1
34.7275 Ahg930186 cell wall-plasma membrane linker protein
35.2846 Ahg486504 Protein of unknown function (DUF630 and DUF632)
37.47 Ahg492921 Pectinacetylesterase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression