| Annotation |
|---|
| Description | jgi|Araly1|474623|fgenesh2_kg.1__4577__AT1G55620.2 |
| Sequence |
CGCGTGTTTC TTTATCGACT CGGAATCTGA ATCCGATCAA ATCTGAACAG CACCGGCGAC GAATCTCTGC GGCGTAGATT TATATTTCGT CCCGGAGAGA CGAAATTGAT GCAATCGTGA ACTATCACGG CGAAGGGATG ATGTGTTGGT AACAGCCAAT TGAAATCAGA TAATGTCATC GGGAGGAGCC GGAGAGTACA ACGAAGACAG ACATCTGTTA CGATCCACCG ACGGCGATGA AGTAGGCATT GGCGGAGGAG ATGGTGATCT CGATGTTGAA TCTCAGTCTC CGGCTGTCAG AAGTGGAGCT GGAGGAGTTA GGGATCTGTT CATGCATCTA GATCGGAGAT TTTCTCTTTC CGGTCGTCGT TTAAGCTTTA AACGGATGGA GAATATCAGA GTGGATAGAG AGCGACATAA TCCGTCTTCC TCTTCCGCGT TATCGGCTGC TGGAGTAGAA GATGGTGGTG GTATCAGTAA TTTACATAGC GGCGATGATC GAAATGACGA GTACGGGTTT GATGAAGAAG TGCTCGGAGA TAGTGCTCCA CCTGAGTGGG CTCTGCTTCT CATCGGATGT CTTATCGGTG TTGCCGCTGG AATTTGTGTC GCCGGCTTCA ATAAAGGGGT TCATGTCATT CATGAGTGGG CATGGGCTGG TACTCCCAAC GAAGGTGCTG CATGGCTTCG TCTACAGAGA CTTGCTGATA CTTGGCACCG AATTCTTCTA ATTCCGGTCA CTGGAGGTGT TATAGTAGGA ATGATGCACG GTTTGCTTGA GATCTTAGAC CAAATCAGGC AATCTACTTC TTCTCAAAGA CAAGGACTAG ATTTTCTTGC TGGTATTTAT CCAGTGATAA AGGCCATCCA AGCTGCTGTG ACCCTTGGTA CAGGATGTTC ACTGGGGCCT GAGGGACCTA GCGTCGACAT TGGAAAGTCA TGTGCCAACG GTTTTGCACT CATGATGGAA AACAACAGAG AAAGGAGAAT AGCTCTCACT GCAGCTGGTG CGGCTTCCGG GATTGCATCT GGTTTCAATG CAGCAGTGGC GGGTTGTTTC TTTGCTATCG AGACCGTTTT AAGACCTCTA CGGGCCGAGA ACTCGCCTCC ATTTACCACT GCAATGATAA TATTGGCCTC TGTTATATCA TCGACCGTGT CAAATGCACT GCTTGGGACT CAATCCGCTT TCACAGTTCC ATCATACGAC CTTAAGTCAG CTGCAGAGCT CCCTCTGTAC CTGATATTAG GCATGCTTTG CGGTGCTGTC AGCGTTGTTT TTTCTCGTCT CGTCACATGG TTTACCAAGT CGTTCGACTT CATCAAAGAC AAATTTGGTC TTCCTGCTAT TGTGTGCCCT GCACTAGGTG GTTTAGGAGC TGGAATTATT GCTCTCAAGT ACCCTGGAAT TTTGTATTGG GGGTTTACAA ATGTTGAGGA AATCCTGCAT ACTGGAAAAA GTGCTTCAGC TCCTGGAATC TGGTTGTTAG CTCAGTTAGC CGCAGCCAAA GTTGTGGCTA CAGCTCTTTG CAAAGGCTCT GGGCTTGTAG GCGGTCTATA TGCACCAAGT TTGATGATTG GTGCTGCTGT TGGTGCTGTA TTTGGTGGTT CGGCTGCTGA GATTATTAAC AGAGCTATTC CTGGTAATGC TGCTGTTGCT CAACCACAAG CTTACGCTCT GGTTGGAATG GCAGCGACTC TAGCTTCCAT GTGCTCTGTT CCTTTAACAT CAGTATTACT GCTGTTCGAG CTAACGAAAG ATTATAGAAT TTTGCTTCCC CTCATGGGAG CTGTTGGTTT AGCAATATGG GTTCCCTCTG TGGCAAACCA AGGCAAAGAG AGTGATTCGT CTGAAGGTCG CAGCACAGGA AGAGGATACT CTTCTATTTC ACCTTCCGAC CGTAAAACCG AAGGCGTCTG GAGACACACT GATGATGCTG ACTCCCTTGA GCTTACTGTC ATAGAGAACC CTGACCATAA TTCCTTTTTG GATGAAGAAA CTATTCTGGA AGACTTAAAG ATAATGCGGG TTATGTCAAA GAACTACGTG AAAGTTTCTT CAGGAACAAC TCTAAGAGAA GCAAGAAACA TCCTTAAAGA CAGCCACCAA AACTGCCTTA TGGTGGTCGA TGACGATGAT TTTCTAGCCG GAATTCTAAC ACACGGCGAT ATCAGAAGAT TCTTGTCAAA TAACGTCTCT ACAATCTTTG ATGAGAATAC ATGTCCGGTT TCTTCTGTGT GTACTAAGAA AATAAGCTAC AGAGGCCAAG AACGCGGTTT ACTTACTTGT TATCCAGACG CGACGGTTGG TGTAGCGAAG GAGTTGATGG AGGCAAGAGG TGTGAAGCAA TTACCTGTTG TAAAACGAGG TGAAGTAATT CACAAAGGAA AACGGAGGAA ACTGCTTGGC CTCCTTCATT ATGACTCCAT TTGGAGTTTT CTCAGAGATG AAATGAGTCG TAGGAGATCG ATCAACGACC GGAGAAAAGA CAAAGAGGTT GGTGCAAATG GGCATTGATT GGGTTTGTGC CCATTTTGGT ATAGCTTTTT ATTTTTATAT TCTTCTTTTT AATTTTTGAG GTCCAAATTG ATTAGAACGA GGAAAAAACA AGATCCTAAA AGTAATATTA ATATATACCT CTGTATTAAT TTTGAAAATA TTGTTCTCAC CAAAGCAGAC TCATATCACA TCATCAAAAG AAATCTAGTG AAA |
| Length | 2713 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 27954839.. 27958919 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G55620.2 |
| Description | chloride channel F |
| TAIR curator summary | Encodes a chloride channel protein that has been localized to the chloroplast and golgi apparatus. Complements yeast gef1 mutant and therefor may function to acidify the golgi lumen. |
| Alias | [ATCLC-F][CLC-F][CLCF][chloride channel F][CHLORIDE CHANNEL F] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.38083 |
Ahg489218 | XS domain-containing protein / XS zinc finger domain-containing protein-related |
| 22.2486 |
Ahg495407 | Galactosyltransferase family protein |
| 29.4618 |
Ahg482661 | ARM repeat superfamily protein |
| 29.5466 |
Ahg940499 | leucine-rich repeat transmembrane protein kinase family protein |
| 29.9333 |
Ahg344464 | Structural maintenance of chromosomes (SMC) family protein |
| 30.2655 |
Ahg495958 | HEAT/U-box domain-containing protein |
| 30.3974 |
Ahg495848 | voltage dependent anion channel 4 |
| 32.3265 |
Ahg322232 | |
| 32.665 |
Ahg484824 | dicer-like 3 |
| 33.3467 |
Ahg477298 | hydroxyproline-rich glycoprotein family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|