Detail



ID : Ahg486694

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486694|fgenesh2_kg.5__2686__AT3G61890.1
Sequence
AAAGAAGAAA CAAATAATTC CAAAACCTTC TCTCTTAATC GAAATCAAGA AACTTGCAAG ATCTGGTGAA AACCATGGAA GAAGGAGATT TTTTCAACTG CTGCTTCAGC GAGATTAATA GTGGCATGAC CATGAATAAG AAGAAGATGA AGAAGAAGAG CAATAGCCAG AAGAGGTTTA GCGAGGAACA GATCAAGTCA CTTGAGCTTA TATTTGAGTC CGAGACGAGG CTTGAACCGA GGAAGAAGGT TCAGGTAGCT AGAGAGCTAG GGCTGCAACC AAGACAAGTG GCTATATGGT TTCAGAACAA GAGGGCTCGT TGGAAAACTA AGCAACTTGA GAAAGAGTAT AACATTCTTC GATCCAATTA CAACAATTTG GCTTCACAAT TTGAAATCAT GAAGAAAGAA AAGCAATCTC TTGTCTCTGA GTTGCAGAGA CTAAATGAGG AGATGCAAAA GCCTAAAGAA GAAAAGCATC ATGAGTGTTG TGGTGATCAA GGAGTGGCTC TAAGCAGCAG CACAGAGTTG CATAATGGAA AGAGTGAGCC AGAAGTGAGG TTAAACCAAG GGATTGTTCT ATGTGATGAT GGTGATTACA ACAACAACAT TAAAACAGAG TATTTTGGGT TCGAGGAAGA GACTGATCAT GAGCTCATGA ACATTGTGGA GAAAGCTGAT GATAGTTGCT TGACATCTTC TGAGAATTGG GGAGGTTTCA ATTCTGATTC TCTGTTAGAC CAATCTAGCA GCCATTACCC TAATTGGTGG GAGTTTTGGT CATAAAAACA TATAAGAAAG AAACAAAACA TAAGTGAAGA GAAAGAGTGT GAATAGTTTG TAGATTATGT GTTAAGGAAA ATAAATTTTA GTTTAGTTTA AATCTTGTTT CGATCTATGT ATCTACTATG TTCAATACTC TTTGTAGCTA ATTAGTAGCT TATGATGAGA CTAGAAAAGT TTTGAAGTCA TCATGGTT 
Length978
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19423763.. 19424954
Download Sequence
A.thaliana
AGI-codeAT3G61890.1
Descriptionhomeobox 12
TAIR curator summaryEncodes a homeodomain leucine zipper class I (HD-Zip I) protein. Loss of function mutant has abnormally shaped leaves and stems.
Alias[ATHB-12][ATHB12][HB-12][homeobox 12][ARABIDOPSIS THALIANA HOMEOBOX 12]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg322281 G-box binding factor 3
5 Ahg926219 ABI five binding protein
7 Ahg483149 cystatin A
7.74597 Ahg474686 nuclear factor Y, subunit C2
10.198 Ahg897457 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
10.9545 Ahg475300 ARM repeat superfamily protein
11.3137 Ahg325294 Late Embryogenesis Abundant 4-5
13.3041 Ahg318392 AMP-dependent synthetase and ligase family protein
14.0712 Ahg479940 beta-amylase 1
18.6548 Ahg483960 TSPO(outer membrane tryptophan-rich sensory protein)-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression