Detail



ID : Ahg475916

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475916|fgenesh2_kg.2__1046__AT1G68070.1
Sequence
TTTTGACTTT TGAGTGGTAC TGATAGGTAC AAAGAAACAC AAACCCTAGA TTTATCTTCA TCTCTCTCAA TTCTGTGTCA AGCGAAGACG GATTCAACGA TGTCTTCACC TGAATCACCT TCCGGTTCCG ACTCATCCAC ACCACTTCTC CGTTCACGGC AATCATCACC ACGTCGTCCA CCTGTAATCG CGGTTCTATT AGGTCGAGCT TCAGGACGAC GAGGAGCTTC GATGGTGGTT AGAGAGACAG CTGCTCAAGA GCTTGAAGAG CGACGAGCTG ATTGGGGTTA CTCGAAACCC GTTGTTGCTT TGGACATGCT TTGGAACACT GCGTTTGTTG TTGTTGCGAT TGTGATGCTT TTGGTTTTTA AAGAAGAGAA GCCAAATGTT CCGATTAGGG TTTGGATCTG TGGTTATGCG ATTCAGTGTC TTGTTCATGT TGTGCTTGTT TGGCTTGAGT TTAGGAAGAG GAATGCTAGG ACTCGAACTG GGGATTTAGA AGCTGCTCAA GGTTCTGGTA ATCAGGATAG TGAGGATGAG GATAACGATG AGAGGATTCT GAGCACTAAG ACTTGTGAAT CGATGAACAC TATAATATCA TTTATCTGGT GGATTGTTGG CTTCTACTGG CTTGTATCTG GTGGTGATAT CCTTCTGCAA AATGCGACGC ATTTGTATTG GTTAACCTTT GTTTTCCTTG CATTTGATGT GTTTTTCGCC ATCTTTTGCG TTGTGTTGGC ATGTCTTATC GGAATCGCCC TCTGTTGCTG CCTCCCTTGT ATTATTGCTC TTCTTTACGC CGTTGCCGGG CAGGAGGGTG CATCAGAAGC AGATCTCAGC ATCCTTCCCA AGTACAGGTT TCAGGCGCTG AACAATGATG AAAAGCAAAG TGATGGTGGT GGGAAAATGA TACCCGTCGA GGCAGGCAGT GAGAATTTGG GAAATGAACG TGTGCTTCTT CCCGAAGATG CTGACTGTTG CATATGTCTG AGTTCATATG AAGATGGAGC AGAGCTGGTC TCACTTCCTT GCAACCACCA CTTTCATTCG ACGTGCATCG TGAAATGGCT GAAAATGAAT GCGACATGTC CACTGTGCAA GTTCAATATT CTCAAAGGTA ATGAACAAGA ATGAAGTAAT ATAGAGGAAG CTTTTCATCT TTTTTTATGT TGTGTTGTTT TTGTTGTATA GAGAGAGTAG AGAAAAAAAA GAAAATGATT ATGTCGTTTG TGTAAGTCAT AAGACAAATT GTTTCTTTGT TGAAA 
Length1265
Protein Sequence
Protein Residue
Map Locationscaffold_2: 12098054.. 12100142
Download Sequence
A.thaliana
AGI-codeAT1G68070.1
DescriptionZinc finger, C3HC4 type (RING finger) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.48683 Ahg481034 cold, circadian rhythm, and rna binding 2
15.8114 Ahg482047 Protein of unknown function, DUF647
17.5499 Ahg934616 phosphorylethanolamine cytidylyltransferase 1
18 Ahg480683 Senescence/dehydration-associated protein-related
18.7083 Ahg491320
19.3907 Ahg356828 cold regulated gene 27
20.3961 Ahg480799 F-box family protein
25.2982 Ahg490624 farnesylated protein 6
25.3969 Ahg479847 Splicing factor 3B subunit 5/RDS3 complex subunit 10
28.3019 Ahg918912 secretion-associated RAS super family 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression