Detail



ID : Ahg476027

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476027|fgenesh2_kg.2__1157__AT1G68980.1
Sequence
GAGACGATTC CTTGTTTCTC GAATGTTGAG AAAGACTCTA ACTTTAATCT CACTAAGAAG ACCCTTCTCT TCAATTTCCC GAAAACCATC GCCTAAAACC CTAACCCCAC ACCAAAAGTC CTCCTTTGAA TCTACTCTCC ACCATTCACT AATCACCCAC GACACTGATC AAGCATGGAA GGTCTTCCGA TCCTTCGCCG CCGCTTCTTC TCTCCCCGAC AAGCGTCTCC TCAATTCTCT CATCACCCAC TTGTCCTCCT TCCACCACGC AGATCAAAAC ACCTCCCTCA GGCACAGACT CAAGCGTGCC TTTGTTTCCA CGACTTACGT CATCGAGAAA GATCCGATTT TGCTTGAGTT TGAGACCATC CGTACGGTTT TGGAGTCAAT GAAACTAGCG AAAACTTCCG GGCCAGCGTT GGCTTTGGTG GAGTGTATGT TTAAAAACAG GTACTTTGCT CCTTTTGATC TCTGGGGGCG TTTGATTATT GATATCTGTA GTGAAACTGG AAGCCTGGCT GCGTTTCTTA AGGTTTTTAG GGAAAGTTGT AGAATTGCAG TATATGAGAA GCTTGATTTT ATGAAACCGG ATTTGGTAGC TAGTAATGCG GCTCTTGAAG CGTGTTGCCG GCAGTTGGAA TCTCTGGCTG ATGCTGAAGA TGTGATTGAA TCTATGGCTG TGTTGGGTGT GAAGCCTGAT GAATTGAGCT TTGGGTTTCT TGCTTATTTG TATGCGAGAA AGGGGCTTCG AGAGAAGATA AGTGAGATTG AGAATTCAAT GGATGGTTTT GGGTTTGCAA GTAGAAGAAT CTTTTATTCT AGTGTGATCA GTGGATATGT TAAGAGTGGT GATTTAGATA GTGTTTCTGA TGTTATACTG CATAGTCTTA AAGGAGGTGG AGAAGACTCG AGTTTCGGTG AGGAAACGTA CTGTGAATTG GTGAAAGGGT TTATAGAGAG TAAAAGCGTT AAGTGTTTAG CCAAACTGAT AATCGAAGCT CAGAAGCTTG AATCTCTGTC CGTTGACGTT GACGGTTCAA TTGGGTTTGG AATCGTAAAT GCTTGTGCCA AGCTCGGTTT TTCGGGTAAA AGTATTCTCA ATGAAATGAA TGCTCAGGGA GGATCTGGTG GGATTGGGGT GTATGTGCCG ATCTTGAAGG CCTATTGCAA AGAAGGCAGA ACAGATGAAG CTACTCAGCT GGTTACAGAG ATCAGCAGCT CTGGGCTTCA ATTAGACGTT GAGACCTATA ACACTATGAT CGAAGCTTCC ATGACGAAAC AGGATTTCCT ATCTGCGCTT ACACTGTTTA GGGATATGCG AGAAACAAAA GTATCAGATT TGAAAAGATG CTACTTAACA ATAATGACAG GTCTCCTTGA GAATCAGAGA CCTGAGTTAA TGGGAGAGTT TGTGGAGGAA GTTGTGGAAG ATCCTCGCGT AGAAGTGAAG TCCCATGATT GGAATTCGAT TATCCATGCC TTCTGCAAAT CTGGGCGTCT AGAAGATGCA AAGAGTACAT TCAGAAGGAT GGCTTTCCTT CAGTACGAGC CAAATAACCA GACATACTTG TCGTTGATCA ATGGATATGT GAGCTGCGAG AAGTACTTCG AGGTGGTGGT TTTGTGGAAA GAGTTCAAAG ACAAGAATGC AAAACTAGAG CATGCTCTTG CAGATGCGTT CTTGAATGCA TTAGTCAAAG GAGGGTTCTT TGGCACGGCA TTGCAAGTGA TAGAGAAATG TCAGGAGATG AAGATATTTG TGGATAAGTG GAGGTACAAG GCAACGTTCA TGGAGACTCA GAAGAACCTC AGATTGCCAA AGTTGAGGAA GAGGAAGATA AAGAAAATGG AGTTGCTTGA TGCCTTTAAG AACTGGGTTG GTCTTACCAC ATGA 
Length1894
Protein Sequence
Protein Residue
Map Locationscaffold_2: 12707379.. 12709272
Download Sequence
A.thaliana
AGI-codeAT1G68980.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.9706 Ahg492266 C2H2-like zinc finger protein
26.3818 Ahg922436 RING/FYVE/PHD zinc finger superfamily protein
27.3861 Ahg929879
28.5482 Ahg938852 DNAse I-like superfamily protein
30.8869 Ahg341076 myb domain protein 3r-3
35.1426 Ahg489315 Transducin/WD40 repeat-like superfamily protein
39.2428 Ahg326105 DNA repair protein Rad4 family
39.5727 Ahg484159
50.04 Ahg922444 D111/G-patch domain-containing protein
64.2495 Ahg485145 PLANT U-BOX 39
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression