Detail



ID : Ahg476393

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476393|fgenesh2_kg.2__1523__AT1G72610.1
Sequence
ACACAGTTTA TCCAACACCT CTCTATATAA ACACTCGAGA AGAGTAGAGA AAAAAAGAAA AGAAAAGAAG AGAGTTAGTT CTTAAACCAA TCATTCAAAA ATGATGCGTA CTATCTTCCT CTTATCTCTT CTCTTTGCTC TATCCAATGC CTCTGTTCAA GATTTCTGTG TCGCAAACCT GAAACGCGCT GACACGCCTG CGGGTTACCC TTGCATTCGT CCCATTCATG TCAAAGCTAC AGACTTTGTC TTCTCTGGCT TAGGCACTCC CGGAAACACT ACAAACATCA TCAGCGCCGC TGTCACGCCC GCTTTCGTCG CTCAGTTCCC AGGTCTGAAC GGTCTAGGCC TCTCTACAGC TAGACTTGAC CTAGCTCCTA AAGGTGTGAT CCCAATGCAC ACTCACCCTG GTGCCTCTGA GGTTCTCTAT GTCCTTGACG GCTCCATTAC CGCTGGGTTT GTCTCCTCTG CAAACGCTGT CTACGTGCAG ACACTTAAAC CAGGACAGGT CATGATTTTC CCACAGGGAT TGCTGCATTT CCAGATCAAT GCAGGAAAAT CCTCTGCAGC AGCCATTGTC ACATTCAACA GCGCTAGTCC GGGTCTGCAG ATTCTCGATT TCGCACTCTT TGCTAACAAT CTTCCCACTG AACTCGTTGT GGGTACTACT TTCCTTGACG CTACTACAGT CAAGAAGCTA AAGGGTGTTC TTGGAGGAAC CGGCTAAAAA AAGACTTAGG ACTCCTTGAC TAAAACACCA AAACCTGTTT CTTCTTCTTC TTTTCTCTTT GATTGATTCT TGTCTTCTCT GTTTTGTGTC CCGTGTAATT CTTCAAAACC TGTCAAAATG GTTACATTGT ATGTGAGTTT TT 
Length872
Protein Sequence
Protein Residue
Map Locationscaffold_2: 14586485.. 14587368
Download Sequence
A.thaliana
AGI-codeAT1G72610.1
Descriptiongermin-like protein 1
TAIR curator summarygermin-like protein (GLP1)
Alias[ATGER1][GER1][GLP1][A. THALIANA GERMIN-LIKE PROTEIN 1][germin-like protein 1][GERMIN-LIKE PROTEIN 1]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg480276 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
1.41421 Ahg493180 arabinogalactan-protein family
2.82843 Ahg483684 FASCICLIN-like arabinogalactan protein 8
3.16228 Ahg930186 cell wall-plasma membrane linker protein
4 Ahg487977 Protein of unknown function, DUF642
4.24264 Ahg478847 pectin methylesterase 3
4.69042 Ahg474107 Leucine-rich repeat (LRR) family protein
4.69042 Ahg473169 GDSL-like Lipase/Acylhydrolase superfamily protein
4.89898 Ahg490641 proline-rich protein 4
4.89898 Ahg904619 Pollen Ole e 1 allergen and extensin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression