Detail



ID : Ahg476701

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476701|fgenesh2_kg.2__1831__AT1G75540.1
Sequence
CGATCGATGA AGATCAGGTG CGACGTCTGC GACAAAGAAG AAGCGTCGGT GTTTTGTACC GCCGACGAAG CATCTCTCTG CGGCGGCTGC GACCACCAAG TCCACCACGC TAACAAACTC GCCTCTAAAC ATCTCCGTTT CTCTCTCCTC TATCCTTCTT CTTCCAACAA CTCCTCTCCT CTCTGCGACA TCTGTCAGGA TAAAAAAGCC CTGTTGTTTT GTCAACAAGA TAGAGCTATT TTATGCAAAG ATTGTGATTC ATCGATCCAC GCAGCGAACG AACACACAAA GAAACACGAT AGGTTTCTTC TTACAGGGGT TAAGCTCTCT GCTACATCTT CTGTTTACAA ACCTACTTCA GAGTCTTCTT CTTCAAGCAA CCAAGATCTC TCTGTTCCTG GATCATCAAT CTCTAATCTT CCTCTCAAGA AACCTTTCTC AGTTCCTCCT CAGAGCAACA ACAACTCCAA GATCCAACCC TTTTCGAAGA TCAGCGGCGG TGATGCGGCG GTGAATCAGT GGGGATCCAC AAGCACGATT TCAGAGTATT TGATCGATAC GTTACCTGGT TGGCACGTTG AGGATTTCCT CGATTCCTCT CTTCCTACTT TTGGTTTCAC CAAGAGTGGT GATGATGATG GAGTGTTACC ATATATGGAA GCAGAAGATG ACAACACTAA GAGAAACAAC AACAACAACA ATACAGTGTC ACTTCCATCT AAGAATTTAG GGATTTGGGT CCCTCAGATT CCACAAACTC TTCCTTCTTC ATACCCAAAT CAATACTTTT CTCAAGACAA CAACAATACA CAGTTTGGGA TGTACAACAA AGAAACATCA CCAGAAGTAG TGTCTTTTGC TCCATTACAA AACATGAAAC AACAAGGACA GAACAACAAG AGATGGTATG ATGATGGTGG CTTCACTGTC CCACAGATTA CTCCTCCTCT TTCTTCTAAT AAAAAGTTTA GATCTTTCTG GTAATTTACT ATCTCCCTAA ATGGGGCTTT TGTTTGTTTG TTTCTCCATT TCTCTCAACT TCGATCTTAA TAGAATTAGG CTCTCTCTAT TTTTGTGTTC TGT 
Length1083
Protein Sequence
Protein Residue
Map Locationscaffold_2: 15799827.. 15801250
Download Sequence
A.thaliana
AGI-codeAT1G75540.1
Descriptionsalt tolerance homolog2
TAIR curator summary
Alias[AtBBX21][BBX21][LHUS][STH2][B BOX 21][B-box domain protein 21][long hypocotyl under shade][salt tolerance homolog2]
Gene coexpression
MR
MR Locus Description
10.2956 Ahg319530 maternal effect embryo arrest 14
10.9545 Ahg919385 Protein kinase superfamily protein
14.1774 Ahg486329 citrate synthase 2
16.2481 Ahg355292
19.4936 Ahg945679 WRKY DNA-binding protein 7
23.8747 Ahg482337 Dormancy/auxin associated family protein
26.533 Ahg929203 related to AP2 2
28.9828 Ahg486623 brassinosteroid-responsive RING-H2
29.8496 Ahg479607 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
31.305 Ahg486762
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression