Detail



ID : Ahg476903

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476903|fgenesh2_kg.2__2033__AT1G77390.1
Sequence
TCGTCTCCTT CAAGATCTCT CTCTGCAGAA CAGAAACCCT AAATCTCACC GGAAAACGAT AACGCCGAGC CGGAGATTTC CATTTCTTCT TCAACAATGT CTTCTTCGTC TTCATCGAAG AACCTACCTC AGGAGAATCC GATTCCTCGT CCGAACTTAG CCAAGACTCG AACCTCACTC CGCGATGTTG GAAACCGTCG TGTTCCTCTC GGCGACATCA CAAATCAGAA GACTGGATCA AGAAATTCTT CTTCGTCGTC TACTCTGGTT CATTGTTCGA ATAAGATCTC CCAATCGAAG AAAGCATCAA AGCCTGCTTT ATCTCGTAAT TGGAATTTGG GAATTCTCGA TTGCGGTTTA CCTCCCAAGT CAAATGCGAA TTCAAACATA ATCGTTCCTT ACGAAGACAC CGAATTGCCT CAAATCGATG ATAGTCTTCT ATCTTCATCA CCTGGATTAT CTGTTGATGC CTCTCCTACT CACTCAGACC CGTCAATTTC CACTCATGAC TCTCTCAAGA GCCACATTGT AGAACACATG GTCGAGAGCA GTACTGATGA TGGAAATGAT GATGATGAGA TTGTTAACAT TGATAGTGAC TTGATGGATC CACAGCTTTG TGCTTCCTTT GCTTGTGATA TCTACGAGCA TTTGCGTGCA TCTGAGGTAA AGAAAAGACC GGCCCTAGAT TACATGGAAA GAATTCAGTT AAACATCAAT GCTAGCATGC GTTCTATACT CATTGACTGG CTCGTGGAGG TTGCTGAAGA GTATAGGCTT TCGCCCGAGA CGTTGTATTT GGCAGTGAAC TATGTAGATC GGTATCTTAC GGGCAATGCA ATTAACAAGC AAAATCTGCA GTTACTTGGT GTTGCCTGCA TGATGATCGC AGCAAAATAT GAAGAAGTGT GTGTGCCCCA AGTGGAGGAT TTCTGTTACA TCACTGATAA CACATACTTA AGAAACGAGC TTTTGGAGAT GGAGTCTTCT GTTCTGAACT ACTTGAAGTT CGAATTAACA ACTCCGACAG CAAAATGTTT CTTGAGGCGC TTTCTTCGTG CTGCTCAAGG CAGAAAGGAG GTACCATCAC TGCTGTCTGA ATGTCTGGCC TGCTATCTCA CTGAATTATC GCTGTTAGAT TACGCTATGC TTCGATACGC TCCATCACTT GTTGCAGCCT CTGCAGTTTT CTTGGCACAA TACATACTAC ACCCTTCAAG AAAACCATGG AACGCTACAC TAGAGCATTA CACATCGTAC AGGGCTAAAC ATATGGAAGC ATGCGTTAAG AATCTTCTTC AGCTGTGTAA TGAGAAACCC TCATCTGATG TGGTTGCAAT CAGAAAGAAG TACAGTCAAC ACAAATACAA GTTTGTAGCA AAGAAGCTTT GCCCCACATC ACTACCGCAA GAGCTCTTCC TCTGCTAG 
Length1428
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16620288.. 16622644
Download Sequence
A.thaliana
AGI-codeAT1G77390.1
DescriptionCYCLIN A1;2
TAIR curator summaryEncodes a core cell cycle gene involved in meiosis II during microsporogenesis. Recessive mutants exhibit delayed and asynchronous meiosis in pollen mother cell populations and uncoordinated nuclear division and cytokinesis resulting in dyad microspores.
Alias[CYCA1][CYCA1;2][DYP][TAM][CYCLIN A1][CYCLIN A1;2][TARDY ASYNCHRONOUS MEIOSIS]
Gene coexpression
MR
MR Locus Description
17.8885 Ahg937091 protein tyrosine phosphatases;protein tyrosine phosphatases
28.178 Ahg472531 Vacuolar sorting protein 39
32.0312 Ahg913145 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
61.2372 Ahg479515 alpha/beta-Hydrolases superfamily protein
67.0522 Ahg919812 Glutathione S-transferase family protein
72.0139 Ahg925447 RNA polymerase subunit alpha
79.6555 Ahg472206 trigalactosyldiacylglycerol 1
80.4984 Ahg927178 nitrate reductase 1
91.8041 Ahg482098 UDP-glucosyl transferase 74D1
95.5458 Ahg951020 cycling DOF factor 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression