Detail



ID : Ahg927706

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927706|scaffold_300163.1
Sequence
CGGGTGGTGA AGTGGCGGCG ATGGGAGAAA AGCCGAGGAA GCTGCTTGTG ATGTATGCTT CTCAGACCGG GAACGCTCTT GATGCGGCGG AGCGTATTGG CCGCGAAGCA GAACGCCGTG GATTTCCAGC ATCTATCGTC TCCACCGACG AATTCGACGC GAGTTCCTTA CCTCATGAGG AGGCTGTTGT TTTTGTTGTC TCCACTACAG GGCAAGGAGA CTCTCCTGAT TCCTTTAAGG CATTTTGGAG GTTTCTTCTT CAAAGAAATC TGGGAAACTA TTGGTTGCAA CAAGTTCGCT ATGCGGTGTT TGGATTAGGT GATTCTGGTT ACCAGAAGTA CAATTTTGTA GCAAAGAAGC TAGACAAAAG ATTATCAGAT CTGGGGGCCA CAACCATCAT TGAAAAAGGT CTAGGAGATG ATCAACACCC ATCAGGGTAT GAAGGAACTC TTGATCCGTG GATGCTGTCT TTGTGGAGTA CATTATACCA GATCAATCCA AAATACTTTC CTAGAGGTCC AGATGTGAAG ATTCCTCAAG ATGAAGTAAT TGATCAGCCT AAATATAGGA TTTTATATCA TAAGCGGGAG AAATTGGAGC CTAAATTATT GACAGAGTCA GATATCATAC AAAGAGCCCG TGGAATGTCC CCGGGAAAAT TATTCAAGGA CAAAAGTAAA CCAGACTGCT TTCTCAAGAT GACCAGAAAT GAAGTCTTGA CTAAAGCTGG AAGCACAAAG GATGTCCGCC ACTTTGAGTT CCAATTTGTT TCTTCTAATA TTGAATATGA AGTCGGTGAT GTTGTTGAGC TTCTTCCTAG CCAAAATCCT TCAGCAATAG ATGCGTTTAT AGAACGCTGC GATTTAGACC CAGAATCATT CATCACAATT GGTCCGAGAG AGACAGAGAA TAGTAGTTTC AATGAAGAAA TGATTACACA GCTCCCTATC AAGCTTAAGA CTTTTGTTGA ATTAACAATG GATGTTACAT CCGCTTCACC TCGACGATAC TTCTTTGAGG TTATGAGCTT CTATGCAACA GCTGAACATG AGAAGGAAAG ACTTCAATAC TTTGCCTCAC CCGAGGGGCG GGATGATCTC TACAATTACA ATCAGAAGGA AAGAAGGAGC ATTCTTGAGG TGCTAGAGGA TTTTCCTTCC GTACAAATCC CATTTGAGTG GCTAGTACAG TTAGTCCCAC CGCTAAAACC AAGAGCTTTT TCGATATCAT CGTCTCCTTT GGCCCACCCT GCTCAAGTAC ATTTGACCGT AAGCATAGTA TCATGGATCA CGCCTTATAA GAGAACTCGA AAAGGTCTGT GCTCCTCTTG GCTTGCAAGC CTCACACCTG AACAAGAGGT AAACATACCG GTTTGGTTTC ACAAAGGCTC CCTTCCTGCT CCATCACAGT CGCTTCCGCT CATCTTAGTG GGACCTGGAA CCGGATGTGC GCCTTTCCGT GGGTTCATAG CTGAGAGAGC CGTACAAGCT CAGTCTAGCC TGATTGCGCC CGTCATGTTC TTCTTCGGTT GCAGAAACAA AGACACAGAC TTTCTATACC GCGACTTCTG GGAGTCTCAC GCAAGAGAAG GAGGCATGCT CTCTGAAGGA AAAGGCGGTG GCTTTTACAC AGCGTTCTCT AGAGACCAAC CGAAGAAGGT TTACGTGCAA CATAAGATCC GCGAAATGAG CAAGAAAGTT TGGGATTTAC TCTGTGATGG AGCTGCTGTT TACGTGGCGG GCTCGTCGAC GAAAATGCCT TGTGATGTGA TGTCGGCTTC GGAGGAGACA GGAGGATCAA AGGAGGTAGC TTCACGGTGG CTCAAGGCTT TGGAGAAGGC AGGGAGGTAC GAGGTACAAT GTTGAAGCTT GGTCTTAACT CTCTTA 
Length1886
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT3G02280.1
DescriptionFlavodoxin family protein
TAIR curator summary
Alias[AtTAH18][TAH18]
Gene coexpression
MR
MR Locus Description
2 Ahg483031 RNI-like superfamily protein
2.64575 Ahg341309 Sterile alpha motif (SAM) domain-containing protein
3 Ahg495812 DNA ligase IV
4.89898 Ahg476142 Sterile alpha motif (SAM) domain-containing protein
6 Ahg337067 AAA-type ATPase family protein
6.16441 Ahg933960 P-loop containing nucleoside triphosphate hydrolases superfamily protein
7.07107 Ahg891524 homolog of xeroderma pigmentosum complementation group B 1
8.12404 Ahg491758
11.4891 Ahg490142 glucan synthase-like 1
11.8322 Ahg477051 conserved peptide upstream open reading frame 56
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression