| Annotation |
|---|
| Description | jgi|Araly1|487009|fgenesh2_kg.6__143__AT5G02310.1 |
| Sequence |
ATGGAGACCA ATTCGCCTCT TTTTGGTTCA GTTCCTCCTA GCTCGCATGA TTTGGTCATT GAGAGGCTTG CCTCTGTGGG GGTTCCTAAA AAATACCGCT CTAAACGTGG CCTAGTGGAA TTCGTTAGGG CTAACCCGGC TAAGATTTCA GAGTTAGTCT CTGCTCTCTT ACCTACAGAT GAGGATGTTA AAATAGGATT GAAGGAAGCT AGGGAACGGT CTCGAAAGTC TGCGGTGAGT CCTAGCATGA AAAAGAGGTT CAGGGAGAGC ATGAATATGC TCCAGTGGTT GATGTTCCAG GATGAGCCTG ATGTTTCTTT GAGGAATCTA GCAAAATTGA ATCTTGATCA GCGAGCTGTT TGTGGCTCTG TCTGGGGACA CAATGATATA GCATATAGGT GTAGGACATG CGAGAATGAC CCAACTTGTG CAATCTGCGT GCCTTGTTTC CAGAATGGGG ATCACAAGTC CCACGATTAT TCGATCATCT ACACAGGTGG TGGTTGTTGT GATTGTGGGG ATGAGACGGC ATGGAAACGG GAGGGTTTCT GTTCAAGTCA TAAAGGCTCT GAACAGATTC AACCCCTATC AGAAAATCTA GTAAATTCAG TTGGGCCTGT ACTTGATGCC CTTTTTACTT GTTGGAATAA TAAGCTCTTA TCTGCAGAAA GTATTGGTCA GAAAGGTGCT AGATCCAACG ATACTCTTGT GGTACTCCAA AAGATGTCAA ACGAGCTGAC ATTTATAGTG GTTGAAATGC TTCTGGAGTT TTCTATGTCC AGTGAGAGTT TGCTCAGTTT TGTTTCTAGA AGGATTATCT CTTCAAGTGG TTTATTGAGT ATTCTCTTAA AGGCTGAGAG GTTCTTGGAC CAAGATGTTA TGAAGAAACT ACATGACTTG TTCCTCAAAT TAATAGGAGA TCCAGTCTTC AAGTGTGAAT TTGCAAAAGC ATTTGTGAGT TACTATCCAG TTGTCATAAG TGAAGCGGTT AAGCAGGGTA CTGATAGTGC ATTCAAGAAA TATCCTCTAC TGTCCACATT TTCTGTGCAA ATACTCACGG TGCCAACTCT AACACCATTT CTGGTGAAGG AAATGAATTT GCTAGCTATG CTTTTGGGAT GCCTAAGTGA TATCTTTGTT TCTTGTTCTG GGGAGGATGG TGTGCTACAG GTTACAAAGT GGGAACGGTT GTATGAGGCA AGTGAACGTG TCATTGGAGA CTTGAGATTT GTTATGAGCC ATGCTGTAGT TTCTAAGTAT GCAACACATG AACAACGTGA GTTATCAAGA TCATGGTTGA TACTCTTGAC CTTTGCTCAA GGAATGAATC CTTTAAAAAG AGAGACTGGA ATCCCTATTG AAGAAGAAAA TGATTACATG CATTTGTTCT TTCTTTTGGG TCATTCTATA GCTGTTATTC ACTCTCTATT GGTTAATGGT ACATATTCTG GTGCCAGTGA TGGAGAAATA GAAATTGAGA GAACCGCCAT GGAAGAATTT GACAAGTGTG ATGGAGATGG AGAAAGGTAT GCAAAAGTTG GAAGATTGTC TCATGAAGAT TCGGTATGTA CTGCGATGGT AAGCAGCAGC TCGTTTGATA GCTCAATGGC TTCTGAAGTC CACAAAATTG ATCCTTTCTA TGCCCTGCTT CCTTCTTCTG CCATATACTT GATACGCGAA TGTTTGAAAG TTTTGGAGAC ATGCTTAGGA AATGATGAAG GTATAAAAAA TTTTCTTTCC AAGTTGTCTT CTCCTAGCGG CAGAAACATC CCTGGAAGTA AGATGTCGTG GCCAAGGAGA GATTTGTTAA AGGTTGAAAC TGGAGGAAGT GTATCTAGTA ATCTTGCCAG TTCGAGTAGA GATCCGAGTA CTGGCTTATC ACCTCTATGC GGCGATATAC AAACAAATCT TAGCTTGGAT AATGTTTGTG GACCGTATGG GGTGGTTCAG ACAGATGTTA CAGCTGACTC TAAAAGAGTA TCTTGCAACT CTGCTGATTT GACAAAGAAT TCATCAGGAG TACATATACT TGGTCTGTGT GAATGGCCGG ACATTCACTA TGATGTGAGT TCTCAGGCTA TATCAGTTCA TCTACCGTTA CACCGGTTAC TTTCTCTGCT CATAGAAAAA GCATTAAGGG TATGTTATGG AGAATCTGCA TCATACAATG GAGTCAGTAT TAGTCATGAG ATCCCACAGG CAGACTTCTT CAGCTCTGTG ATAGGAGATT TCCATCCTTA TGGATTTTCT GCACTCGTTA TGGAGCATGT TCTACGGATT AGGGTATTCT GTGCCCAGGT TATTGCTGGA ATGTGGAAGA AGAATGGGGA TTCTGCATTA GGATCTTGTG AGTGGTATCG GGCAGTTCGT TGGTCAGAAC AGGGACTTGA GCTTGATCTA TTTCTTCTGC AGTGTTGTGG TGCGTTAGCT CCCGCAGATT CTTATGTTGA TAAGCTTCTC AGTCGATTTG GGCTCTCAAG CTATCTTTCA CTAAATCCGG ATATAACAAA TGAGTATGAA CCAGTTTTGG TCCAGGAAAT GCTTGCTCTT CTGATACAGA TTCTGCAAGA AAGACGATTT TGTGGTCTTT CTATTGCTGA AAGTTTGAGA AGAGAGATCA TCTCCAAGTT AGCCACTGGA GATTTCACTC ATAGTCAATT GGTCAAATCT TTACCCCGTG ACCTGTCCAA GTCGGACGAG CTCCAGGAGG TCTTAGATGA CGTTTCAGTC TATTGCAATC CATCCGGCAT GAACCAGGGA AAGTATTCAC TACGGTCATC TTGTTGGAAG GAATTGGATC TCTACCACCC TCGTTGGCAT TCAAGAGAAT TGCAATCTGC AGAAGAAAGA TTTTCGCGTT ATTGTGGAGT GTCTGCATTG ACCACTCAGC TTCCTAGGTG GAGAATGATC TATCCGCCGC TAAAGGGGCT TGCTAGAATA GGCACTTGCA AAGCCACATT TCAAATAATT TCATCTGCTT TATACTACGC ACTCCAGAGT GGTACATCAG TTAAATCACG TGCCCCTGAT GGCGTTCTCA TTACTGCACT GCACTTACTC TCGTTATCAT TGGATATTTG CACTCAGCAG AGTCAATCTA ATAGTCAGGA TAGTTGCTTA CAAAATTCAA TTCCAATTCT CGAATTGGCT GGTCTGGAAA TTATTGGTAT AGATCAAGGG ACTGAAAAAG AAAGTTTGCT GTCTCTTCTT GTTTCGTTAA TGAGGACTCG TATGGGCGAT GGCCTTCATC AGTTTCCAGA GGCAGGCAGT TGCAATATTT CGTCCTGGAT TGGAAATCTG CTGAAGAAGT TTAGTGCAAT TGATTCTGTT TGTATGAACC TATTGCAAAG TCTTGCCCCA GAGGTGGTTG GTCAATCTGG CTTTGATAAA GTCATGCCAG ATTCTGCTTC TGATGAGAAG CGCAAAGCTA AAGCTAGAGA GAGGCAGGCT GCTATTATGG CAAAAATGAA AGCTGAACAG TCAAAGTTCT TGTCTACCTT GAGTTCCAGC ATGGATGATA ATGATCCAAG ATCTGAAACT GAAAGAAGTG ATTCTGTTAT TGAACATGAT TCAGAAATTG CTGTCCATGA AGTTTGCTCC CTCTGCCAGG ACCCAGAATC CAAAGACTCC GTTTCTTTCT TGATTTTTCT GCAGAAATCT AAACTATTGA GTTTTGTGGA TAGAGGCCCT CCATCTTGGG ATCAAAGTCC ACAATCCGAA AAGAAGATAT CTGTGGATGG AGCTCCTGAT CTTTTGAGAA TGAATGCTTC TTCAGATAGT TTAAGAATAA GTTCTCCTCT CATGCTGCAA TTGTCAGATG ATGCTACCTC TGAGTCTGTG ATTGAATCTT TAAAAGCCCG GCTTATAGGG AATGGTCAGA CAGAGAAGAG GTCTAGCGAT GGGAGGGGAA AAGATGAATC TAACATGGAA TCAGTGGAGA TAGCCATGTA TCAAACTGTT CGCAGAAAAA TTGAAAACAT GATAAATCAA AGCCTTAAAC GTGTAGATCA TCGACACCAT GAAGCTGAAA ATAGTTCGGA GAAAAATTCT GTGGGTGGTC CATCTACTTT GCAAGTTAGA TTGCCTGATA TTCTATCAAG ACAGACTTCC AGGCGTCCTG ATGCTGGTTC AGATGGGTTT CACCTTACCG ACTGTGATGG GATTTATCTT TCATCATGTG GACATGCTGT GCATCAAAGC TGCCTTAAAC GATATTTAAA ATCCTTAAAG GAAAGGTCTG GCAGAAGAAC TGTCTTTGAA GGTGCACATA TTGTGGATCT AGAACAGGGA GAATTTCTGT GTCCTGCATG CCGCCGACTA GCCAATTCCG TATTGCCTGC ATGTCCTGGA GATTTATGTT CTGTCTCAAA GCTACAAGAT GGTCCACGTA CTACAGATGC ACCGAAGCCT TCTCTTTGGC TCTCTGAAGC GTTGTGTCTA CTACGATCTG CTGCTGAAGT GATCGAAGAT GGTGATAGCG GTAAAACAGT TACTCTGCAG GGAGATGGAC CAAGAAGGAA AGATCTTAAA TTTGTCTCTA AAAAGCTCGG GGATTTCTAT TTTCCTAAGC GACAGGAAAA GACTTCGAAA CGTCCGTGGC TACCACAACA ATCAATCGTC ATGTGGGACA CCCTTAAGTA CTCTCTTATT TCATTGGAAA TTGGTGCTCG TTGTGCGAAG AATTCAATGC TTCCTGTCTA TAGTATTGAC TCCATGTATG AAGAGTTTAA AACCTCTACT GGGACTATTT TATCACTTTT ATTACGAGTG GTACAGAGCA CCAAAACAAA GAATGCTATT CATGTTCGTC AGAGATTTGT GGGTATGAAG CATCTTGCAG AGTCTATATG CTATGGGATT TCAAGTAGTT CTTCGAGCAG CATATATGGA AGTGAAGGCA CAACAGGTTC ATTGAAGAAT ATAGACCTGC TCTGGAATCG AGCATCTGAT CCAGTTCTTG CCCATGACCC ATTTTCATCA CTGATGTGGG CTCTCTTTTG TCTCCCTTTT CCTTTTCTCA CATGCGAGGA ATCTCTATTG TCACTTGTGC ATATTTTCCA CAGTGTCTCT CTTGTTCAGA CTGTAATTGC TTATTGTGCA TGTCGCCTAA GTGACTTGAG TGAATTAAAT TTTGGGGAAA ACCTGCTTAA TGACATCTCC AACGCTTTGA GAGAATCAGA TGGTTGGGAG TATTTCAGGT CTAACTATAT GGATTTGTCA TGTGATATAA AAGGCACAAT CCGTAAATAT AGTCTTCCTT TCTTGAGGAG ATGTGCGTTG TTGTGGAAGC TACTGAAATC TACTCCTAGG AAGTTTCATG AAGAGGCAGA TATGTTCGAT TTGCCATCTG ACAATATGGA TTTCATGTAC AGTCCCCAAT CTGAGCTGAA TCATGTGCAA GAATTGGAGA AAATGTTTAA GATTCCACCT ATAGATACCA TTCTCAATGA TGAACTTCTC CGCTCTTCAA CCCAAACATG GCTCCAGCAT TATCAGCGGG AATACAGAGT CAACAGAGTT AAAAGGTCCC TTTGCATCAC CCCTGTAGTT CCTTTCCAGC TAATGAAATT ACCCAATCTA TACCAGGACC TACTGCAAAG GTGTATAAAA AAACGTTGCA GCCACTGCAC CAAAGTTATC GAAGAACCTG CATTATGTCT TCTGTGTGGA AGTTTGTGTT CTCCCATATG GAGGCTTTGT TGCAGAGATA ATAGTTGTCC TACTCATGCA ATTACCTGTG GTGCTGGTAC TGGTGTATAT CTTCTGATAC GGCGGACCAC AATTTTGCTA CAAAGATTTG CAAGGCAATC ACCTTGGCCA TCTCCTTACT TGGATACGTT TGGAGAAGAG GATATCGATA TGGCCAGAGG AAAACCACTA TACCTGAATG AAGAACGTTA TGCCACCTTA ACTGACATGG TTGGTTCTCA TGGACTTGAT CACAGTTCGA AAGTTCTCGG CCAAACCACA ATTGGAGCCT TCTTACTTTA AACAGCGCTC TTTCTCAGAC ATTGGAAATC ATCAGTTAAG ATTCTAAAGA TTTGAGAGCT TTTCTGATGA TTTTTACCTA ATTAATTTCT GTCACTTTGG TTGATTTCTT TATTTGTGGA TATATGAGAT CGTGTTTGTA AATAGAGTAT |
| Length | 6140 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 563837.. 572268 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G02310.1 |
| Description | proteolysis 6 |
| TAIR curator summary | Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. |
| Alias | [PRT6][proteolysis 6] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.16228 |
Ahg480691 | Phosphatidylinositol 3- and 4-kinase family protein with FAT domain |
| 4.24264 |
Ahg928500 | Clathrin, heavy chain |
| 4.89898 |
Ahg472652 | gamma-adaptin 1 |
| 8.12404 |
Ahg488055 | Ubiquitin-associated/translation elongation factor EF1B protein |
| 10.583 |
Ahg328224 | BR-signaling kinase 1 |
| 10.9545 |
Ahg492696 | tobamovirus multiplication 1 |
| 11.8322 |
Ahg477069 | histone acetyltransferase of the CBP family 1 |
| 12 |
Ahg491819 | protein kinase family protein / WD-40 repeat family protein |
| 16.5227 |
Ahg491583 | exocyst subunit exo70 family protein G1 |
| 19.4422 |
Ahg939036 | squamosa promoter-binding protein-like 12 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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