| Annotation |
|---|
| Description | jgi|Araly1|477100|fgenesh2_kg.2__2230__AT1G79350.1 |
| Sequence |
AAAAAGGGAA GAAAATCTGA AACCAAAAAA AACGAGAAGG GAGTCGAAGA ACCTTTCGCG CTCTGGCGAA ATTCATTACT TACACTGATT TATACTTTTG TCTTCCTCTC TCTCAATTAT CTCCTCAAAC GCCACAAGAT CCTTAAGGCC TCGCACGGAT CTCTCTACGA TCAATCGCCG CGGCTCATGA CGCAGTCGCC TGTTCAACCG CCTCCGCCGC TCCCCGCTCC GCCGCATTCC GCCGGCGGTG GTGTAATAAG AGCAGATGTA CAGGTTAGGT GCGCAGGCTG TCGCGTGATT CTGAGGGTGA AGACCGGCGT TGTGGAGTTC TCGTGTCCGA CTTGTCAACT TCCCCAAATG TTGCCGCCGG AGCTTCTTTC TAGGGCACGG CCGCAGTTTC CGCAGTCTCA ACAACAACCA CCACCGCCTC AACCGCAGCC GATTCAGACG CTTCCGCCAC CGATTCAACA GCAGCTTAAG CCTCTTAATT TACCTAGGCC TCCGGTTCCG GCACATGGAA TCGATCCGAC GAAGATGCAA TTGCCTTGCG CTAACTGTCA AGCTATCCTT AATGTGCCTC ATGGACTCAC TCGGTTCTCG TGTCCTCAGT GCCATGTCGA GCTCGCTGTT GATGTCTCCA AGCTTAATCG GTCTTTAACT GCTCCTCAAT CTCATCCTAA TCCTCCTACT CCTACTCCTG CTCCGCCTCC GCCTCCTCCC GAAGAAGTCA ATGAGGAAGC TATTGAAGTG GAGAGAGAAG AAGATGAAGG TGGAACCGCA GGAGAAACTT TTATGGATTA TCGTCCCCCA AAACTTTCAA TTGGACCTCC TCATCCTGAT CCAATTGTGG AAACATCATC TCTATCTGCA GTGCAACCCC CAGAGCCCAC TTATGATCTC AAAATCAAGG AAGAGCTCGA AAGGTCAAAG GCTTTATCGT GTTTGCAGAT TGAGACATTA GTTTACGCTT GTCAGAGGCA TCTCCAGCAC CTTGCTGATG GTACCAGAGC AGGCTTTTTT GTTGGAGATG GTGCTGGTGT GGGGAAAGGG CGAACAATTG CCGGGTTGAT TTGGGAAAAT TGGAAACATG GAAGGAGGAA AGCTTTGTGG ATATCTATTG GCTCAGACTT GAAGTATGAT GCAAGAAGGG ACTTGGATGA TGTGGGTGCC ACATGCGTTG GAGTGAATCC TTTGAACAAG CTACCCTATT CTAAGCTTGA CTCAAAAAAT GTGGGTATTA AAGAAGGAGT GGTATTCTTG ACATACAATA GCCTCATTGC TTCCTCTGAG AAGGGCCGTT CTCGTTTACA GCAGCTTGTT CAATGGTGTG GACCAGAATT TGATGGTCTC TTGATCTTTG ATGAGTGCCA TAAAGCGAAA AATTTGGTAC CTGAAGCTGG GAGTCAGCCG ACACGCATCG GGCAGGCAGT TGTGGATATT CAGGATAAGA TCCCCCAAGC ACGTGTTCTT TATTGCTCGG CTACTGGTGC ATCAGAACCA CGAAACATGG GTTATATGGT CAGGCTTGGT CTTTGGGGAG CTGGAACAAG TTTCAATGAT TTTAACAAAT TTCTAGGTGC CCTTGATAAA GGTGGGACAG GAGCGTTGGA ATTGGTTGCC ATGGACATGA AAGCGAGGGG GATGTATGTA TGCCGAACCC TGAGTTACAA AGGGGCTGAG TTTGAGATTG TTGAAGCTCG TTTAGAAGCA GGAATGGAGG CAATGTACAA TAAGTCTGCA GAATTTTGGG CAGAGCTACG GATAGAGTTG TTGTCAGCAA GTGCTTTTCT CCCTAACGAG AAACCAAATT CTAGTCAGTT GTGGAGATTA TACTGGTCAA GCCACCAGCG TTTCTTTAGA CACCTGTGTA TGTCAGCTAA AGTCCCTGTA ACTGTGAGGT TAGCGAAGAA AGCCTTGTCA ACAAACAAGT GTGTGGTTAT TGGCCTTCAG AGTACTGGAG AGGCTCGAAC CGAAGAGGCT GTAAATAAAT ATGGTCTTGA GCTTGATGAT TTTGTCTCGG GACCTCGAGA GCTCTTGTTG AAATTTGTGG AAGAGAATTA TCCCTTACCC GAGCAGCCTG AACCTCTGTC AGAGGATGAT AGTGTTAAAG AACTTCAGAG GAAGAGGCAT TCAGCTTCAC CTGGTGTTTC AATTAGAGGG AGGGTAAGAA AGATGGCAAA GTGGAAACCA GATAGTGATA ATGAAAGTGA TTTGGAGTCT GAAGGTTGGT TTCCTAGTGA AAACATGTCT TCTGCTGACT CTGCTGACGA TTCTAATGAT TCTGATGATG AGTTCCAGAT ATGTCAGATA TGCAGTGGGG AAGATGAAAG GAAGAAGTTG CTCCATTGTT CTGAATGTGA CAAGCTTTTT CATCCGGACT GTGTGGTTCC TCCAGTAATA GACTTACCAT CGGAAGCGTG GATTTGCTAT TCTTGCAAGG AAAAGACAGA GGAATACATT CAAGCAAGAC GTCTTTACAT TGCAGAATTG CAGAAAAGGT ATGAAGCAGC GTTGGAACGA AAATCAAAGA TCATAGAGAT CATCCGTTCT CTGAATCTTC CAAACAATCC TTTGGATGAC ATTGTCGATC AGCTTGGAGG CCCTGACAAA GTTGCAGAAA TAACAGGCAG GCGAGGTATG CTTGTAAGAG CATCTAATGG GAAAGGTGTT ACATATCAAG CAAGAAACAC AAAGGATATT ACAATGGAAA TGGTCAACAT GCACGAGAAG CAACTATTTA TGGATGGTAA AAAGTTGGTT GCCATTATTT CTGAGGCTGG GTCAGCTGGT GTTTCGTTGC AAGCAGATAG AAGGGCAGTA AATCAGAAAA GAAGGGTTCA CTTGACTTTA GAGCTTCCCT GGAGTGCTGA TCGTGCAATT CAGCAATTTG GAAGAACTCA CCGGTCGAAC CAGACATCTG CACCTGAATA TAGACTACTC TTCACAAATC TCGGTGGGGA ACGCCGCTTT GCCTCTATTG TTGCAAAGAG ACTAGAAACA CTTGGTGCTT TAACACAGGG AGACCGCAGG AAAGTCATGC ACCTTTCTTA TAACTTTGGT AAAAAATCCT TGATGGTGAT GTATCGAGGC ATAATGGAGC AGGAGAAACT ACCTGTTGTT CCTCCTGGAT GCTCGATTGA TGAACCCGAA ACAGTTAAAG AGTTTTTGAC CAAGGCAAGG GCTGCTCTTG TTGCGGTTGG AATTGTTAGG GACAGTGTTC TGGCCAATGG GAAAGATGCT GGAAAGTTTT CAGGACGTAT TATTGATTCT GACATGCATG ATGTTGGACG ATTTTTGAAT CGGCTCTTGG GATTGCCACC TGATATCCAG AATAGGCTGT TTGAATTGTT TACTAGTATA TTAGACGTTC TTGTACATAA TGCTCGGATC GAAGGAAGTT TTGACTCAGG AATTGTGGAT ATGAAAGCTA ATAGTGTTGA GCTGCTGAGC ACTCCAAAGA CCGTCCATGT TGATCAAATG TCTGGTGCCT CAACTATGCT CTTTACTTTT ACTTTGGATC GTGGTGTAAC ATGGGAGTCT GCGAGTTCAA TGCTAGAGGG AAAGAGAAGG GACAGCCTTG GTTCAGCTAA TGATGGCTTT TTTGAATCTA AAAGGGAATG GTTAGGAAGA CGGCACTTCA TATTAGCATT TGAGAGTGCG GCTTCTGGGT TGTTTAAGAT TGTCCGTCCT GCTGTAGGAG AGTCGATCAG GGAGATGTCT CTTTCAGAGT TGAAAACTAA ATACCGAAAA CTCTCTTCTC TGGAGAAGGC TCGTACTGGT TGGGAGGACG AGTACGAAGT TTCATCAAAA CAGTGTATGC ATGGACCCAA GTGTAAGCTA GGCGAGTATT GCACGGTTGG ACGTAGAATA CAGGAAGTAA ACGTTGTGGG TGGCCTCATT CTTCCCATTT GGGGAACCAT TGAGAAAGCT CTCTCCAAAC AAGCCCGTCA CAGCCACAAG AGAATTCGAG TTATACGCAT AGAGACTACG ACGGATAATC AGCGGATAGT GGGCCTCTCC ATCCCAAATG CAGCTGTAGA AACTGTTTTA CAAGATTTAG CATGGGTTCA AGAGATCGAT GATTAAGACA ACGATTATTT ATAAGAAGCA TACACCCTCA AAGCTCCAGA ACCAAGTTCC CATGCCTATT TGTATTTTTC TTTATTTAAA AAAAGAGGAA AAAGACACTT GACTTTCATT TTTGTGTATA TCACATGACA AATTGGCAAG AAGATACATA GATGTAATAT TATTTATCTA ACAAGATTCA TTCTTACGTT C |
| Length | 4281 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 17561165.. 17570257 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G79350.1 |
| Description | RING/FYVE/PHD zinc finger superfamily protein |
| TAIR curator summary | |
| Alias | [EMB1135][embryo defective 1135] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.83095 |
Ahg472334 | U5 small nuclear ribonucleoprotein helicase, putative |
| 8.94427 |
Ahg476302 | Protein kinase superfamily protein |
| 11.225 |
Ahg492906 | Cyclin family protein |
| 12.9615 |
Ahg470391 | Transducin family protein / WD-40 repeat family protein |
| 14.4222 |
Ahg494823 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 15.6525 |
Ahg903021 | auxin transport protein (BIG) |
| 18.3303 |
Ahg477260 | CASC3/Barentsz eIF4AIII binding |
| 18.9737 |
Ahg934879 | Protein kinase family protein with ARM repeat domain |
| 24.4949 |
Ahg487099 | NRAMP metal ion transporter family protein |
| 28.9828 |
Ahg944105 | Tetratricopeptide repeat (TPR)-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|