| Annotation |
|---|
| Description | jgi|Araly1|944105|scaffold_700334.1 |
| Sequence |
TTGATTTCTC CACCGCTCAA AAATGGCGAC GGCGACATCG GAACGAGTCG AGTTAGCCAA GCACTGCAGT TCACGGAACT GGTCTAAAGC GATCCGAGTT CTCGATTCGC TCCTTGCTAA GCAGTCTTCA ATTTTGGATA TATGCAATAG AGCGTTTTGT TATAATCAAT TGGAGCTTCA CAAGCATGTG ATTAAGGACT GTGACAAGGC ACTTCTGCTT GAACCTTGTG CCATTCAAGC TTTTATTCTC AAAGGACGCG CTCTTTTGGC TTTGGGGAGA AAACAGGAAG CTGTTCTTGT TTTGGAGCAA GGATATAAAA ATGCTTTGCA GCAGACAGCA GATGTGAAGC AGTTACTTGA ATTAGAAGAA CTCCTCAAAG ATGCAAGACG AGAAATTGAC GCCACCGAGT CTCGACAAGA GACCCCTGCC TCTCATAGTG AGAAGTCTGA TGAAAAAACT GACAAGCTGG GCAACCATGA ATCAGGAGCA TGTAGCAATG GGAACTCCCA TGACCACGAG GCATCTAGGG AATTGGGTGA GAAATCAAAG ATTATAAGCT TTTCAAAAGA TACATCCAAG GCAAGCAAGC AATCTGATGG TAGTTCCGAC TTATGTAATG GATCAGCGTA TAAGGAAAAA GAGAATGGAA AGTGTGGCAG CCAAATCAAT GGTTCTTATG AATCATGTAA ACCATGTAAT GGTTCTGATT TGCATGATAA TTTAGCTGAA AGTTCCGATC GGTTAGGGGA CCTGTCGATT AATGGAAACA AGTTAATTAT TAAGTCTAGC AAAATGAGCC ATAAAACTGA GGCACGTTGC GATGAAACCA GGAAAAATAA GAAGTACACC ATTGCAAGAA TATCAGGAAC CCATTCTATA AGTGTGGATT TTCGACTTTC TAGAGGCATT GCACAGGTGA ATGAAGGAAA CTATACGAAA GCTATTTCTA TTTTTGATAA GGTGCTGAAA GAAGAACCCA CTTACCCTGA GGCACTTATA GGAAGAGGAA CAGCTTATGC ATTCCAACGA GAGCTTGAAA GTGCTATCGC TGATTTTACT AAGGCTATCC AATCTAACCC AGCAGCAACT GAGGCCTGGA AGCGGAGAGG ACAGGCTCGT GCTGCTCTTG GGGAATATGT TGAGGCGGTT GAAGATTTGA CTAAAGCACT TGTTTTCGAG CCAAACTCAC CTGATGTATT GCACGAAAGG GGTATTGTTA ATTTCAAATC TAAGGACTTC ACTGCTGCTG TAAAGGACCT ATCTATATGT CTGAAGCAAG AGAAAGATAA CAAGTCTGCA TATACTTATT TGGGACTAGC ATTTGCTTCT CTTGGTGAAT ATAAAAAAGC TGAAGAGGCG CATTTGAATT CCATCCAATT GGATAGTAAT TATCTTGAAG CATGGCTTCA TCTCGCCCAG TTCTATCAAG AGTTGGCCGA CCACTGCAAG GCTTTGGAAT GCATTGAGCA GGTTCTACAG GTTGACAACA GGGTTTGGAA GGCCTATCAC TTGCGTGGAC TAGTGTTCCA TGGATTAGGC GAACACAGGA AGGCTATCCA AGAATTATCT ATTGGCTTGA GCATTGAGAA CACAATAGAG TGCTTGTACC TACGAGGTTC CTGCTATCAT GCCATAGGAG AGTATAGAGA TGCGGTGAAG GACTATGATG CTACAGTTGA CGTGGAACTT GATGCAGTGG AGAAATTTGT TCTTCAATGC TTGGCGTTTT ATCAGAAGGA GCTTGCCTTG TATACAGCTT CCAAAGTTAG TAGTGAGTTT TTATGCTTTG ATATTGATGG TGACATAGAC CCTATGTTCA AGGAGTACTG GTGCAAAAGA TTACACCCAA AAAATGTATG TGAAAAGGTT TACAGACAAC CTCCCCTACG TGAATCACTT AAGAAGGGTA AACTGAAAAA GCAAGATCTT GCAATAACCA AACAGAAGGC GAATGTTCTT CGCTTTGCTG ATGTAATAGG CAAGAGGATC CAATATGATT GTCCTGGATT CTTACCAAAC AAACGCCAGC ACCGTATGGC AGGATTGGCT GTGATAGAGA TTGCTCAAAA AGTTTCCAAA GCTTGGCGCA TAGAGTGGAG GAATTCAACC AAAGGCACCA CAAAAAATGG AAAGAAAAAC CGGAGGAGAG AGAGAACCAA CATACTTAGC CAGAATAGAG GTGGTGCTGG GTGTAGTAGT AGCAGTTTCA GTGAAACTTC AACTGGATAT GCCTCACTAG AAGACAGATC ATCTGGCCGC TCTATGTTGT CTTGGCAAGA CGTTTATTCC CCTGCTGTCA GATGGAGACA AATTTCAGAG CCTTGTGACC CAGTTGTCTG GGTTAACAAA CTAAGTGAAG AGTTTAATTC TGGGTTTGGT TCTCATACAC CAATGGTACT CGGACAAGCT AAAGTAGTAC GCTATTTCCC AAATTATGAA AGAACCCTGA CTCTTGCAAA GAGCATCATC AAGGATAAAC TCTCTGTACG CAGCAAGAAA GATAAAGTTA TTGATCTTTC TAAAGACGAG AAGATAGAAA AAATAATGCG TGCTGAAACA TGTGATGAGC TACACAAAAT TGTTGGTGAG GATTTCTGGG TGGCTACTTG GTGCGACAGT ACCGGATCTG AAGGGAAACG CCTCGAAGGA ACTAGAATCA CCTGCATTCA AAAACCGGGA AGGCTTGGGT ACGATTTTTC AATTCGAACT CCATGTACAC CTGCAAGGTG GAGCGACTTT GATGAAGAAA TGACCTCAGC TTGGGAGGCT TTATGCAATG CCTATTGTGG AGAGAACTAT GGTTCTACCG AGCTGGACGC TTTAGAAACC GTTAAAGACG CTATCTTACG CATGACATAT TACTGGTACA ATTTTATGCC ATTAGCTCGA GGGACTGCTG TAACGGGATT TGTAGTATTA CTTGGACTTC TGCTTGCTGC TAATATGGAG TTCACTGAGA CTATCCCGAA AGGGTTACAG ATCGATTGGG AAGCTATACT TAATGTTGAG CCAGATTCCT TTGTTGATTC GGTTAAGTCT TGGTTATACC CGTCCCTGAA AATCAACACG TCGTGGAGAG ATCATCCGGA TATTTCCTCG GCTTTTTCGA CAACAGGAGC GGTTGTTGCG GCGCTTAGCT CTTACAACGA TTGAGTTTCA AATCTCTCTG TCTCTCCCTC TCTC |
| Length | 3184 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 1206539.. 1213208 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G37460.1 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| TAIR curator summary | Encodes a tetratricopeptide repeat domain containing protein that shows sequence similarity to those of transcriptional repressors in other organisms.Involved in mediating effector-triggered immunity. |
| Alias | [SRFR1][SUPPRESSOR OF RPS4-RLD 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.74166 |
Ahg476236 | Cupredoxin superfamily protein |
| 5.91608 |
Ahg945361 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 8.12404 |
Ahg495650 | |
| 8.30662 |
Ahg936501 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein |
| 10.9545 |
Ahg494724 | GYF domain-containing protein |
| 19.2354 |
Ahg935153 | multiprotein bridging factor 1A |
| 24.4949 |
Ahg471269 | S-locus lectin protein kinase family protein |
| 24.98 |
Ahg939499 | prenylated RAB acceptor 1.B5 |
| 25.4165 |
Ahg936489 | succinate dehydrogenase 2-1 |
| 28.9828 |
Ahg477100 | RING/FYVE/PHD zinc finger superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|