Detail



ID : Ahg939405

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939405|scaffold_503596.1
Sequence
ATACTGCAAA GCGCTTCATC ATGATCATGA AGGTATCTAT GGCTATGTGC AAACTACCAT TGCCTCCTTC GCCGGCGTTA GACTTCCCTC CTGCGAGATT TGGTCCCAAT ATGCTATCTC TAAACCCATT TGGTCCAAAG GACAAAGTTG TGGTCATAAT GGGTGCTACC GGAACAGGCA AGTCAAGACT CTCCGTCGAT ATAGCCACAC GTTTTCGGGC TGAGATAATA AATTCCGACA AGATCCAAGT CCACCAAGGT CTAGACATTG TCACCAACAA GATCACGAGC GAGGAGAGCT GCGGGGTACC GCATCATCTC CTCGGCGTCT TGCCGCCTGA AGCGGACTTA ACCGCCCCGA ATTACTGTCA CATGGCGAAT CTCTCCATTG AATCCATCCT AAACCGGGGA AAGCTTCCAA TCATCGTTGG AGGTTCTAAC TCTTACGTGG AGGCTCTAGT GGATGACGAA GACAACAAAT TCAGGTCCAG ATACGACTGT TGTTTTCTAT GGGTCGACGT GGCACTTCCC GTTTTGCATG GGTTCGTGTC TGAGAGGGTT GACAAGATGG TAGAAAATGG AATGGTTGAG GAAGTTAGAG ATTTTTTTGA CTTTTCGGAT TCTGATTACT CAAGAGGGAT CAAGAAAGCA ATCGGAGTTC CAGAGTTTGA CAGGTTTTTC AGGAACGAGC AGTTCTTGAA TGTGGAAGAC AGGGAAGAAC TGTTAATTAA AGTGGTCGAA GACATAAAGA GGAACACATT TGAGTTAGCT TGTAGGCAGA GAGAAAAGAT CGAACGGTTG AGAAAAGTGA AGAAGTGGTC CATTCAGAGA GTGGATGCGA CTCCGGTCTT TACAAAGCGC AGGTCCAAGA CGGATGCTGA CGTGGCCTGG GAGAAGCTCG TGGCTGGACC AAGCACCGAT ACTGTGTCGC GGTTTCTGCT GGACATTGCC AGCCGTCGGC CGCTCGTGGA AGCTTCAACC GCCGTTGCGG CGGCCATGGA ACGCGAGTTG TCGCGGTGTC TAGTGGCGTG ATCAGTTGTA ACCACGCAAT T 
Length1051
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19901294.. 19902342
Download Sequence
A.thaliana
AGI-codeAT3G63110.1
Descriptionisopentenyltransferase 3
TAIR curator summaryEncodes cytokinin synthase involved in cytokinin biosynthesis. IPT3 subcellular localization is modulated by farnesylation- when farnesylated it is localized to the nucleus, otherwise to the chloroplast.
Alias[ATIPT3][IPT3][isopentenyltransferase 3]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg901619 nodulin MtN21 /EamA-like transporter family protein
5.19615 Ahg890129 PEBP (phosphatidylethanolamine-binding protein) family protein
11.4891 Ahg335552 Polyketide cyclase/dehydrase and lipid transport superfamily protein
11.8322 Ahg474806 nicotianamine synthase 4
12.4097 Ahg495722 expansin A14
12.9615 Ahg470140 UDP-Glycosyltransferase superfamily protein
19.0788 Ahg478917 phosphoenolpyruvate carboxylase 3
20.4939 Ahg907877 NADH dehydrogenase subunit J
27.3496 Ahg474085 Family of unknown function (DUF716)
27.5681 Ahg926001 lupeol synthase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression