| Annotation |
|---|
| Description | jgi|Araly1|477280|fgenesh2_kg.2__2410__AT1G79860.1 |
| Sequence |
TCTCAAGAGA GGCCCTTTTG ATCCTCTCTA TCTCTCTCTC TCCTCTCTAA TTCTCTCTTG CCATCAAGAA ACCAGGAATG GTTCGTGCCT CGGAACAAGA ACAGGAAAGC TATAGGAGCA GGCTCTTCAA TTTCAAATGG AGGAACAACG ACAACAATAG TGCTACGAGA CACAACAAGA GTCTCAGCGT CGAGACCGGT TTAGATGAGG CTGCCACCGG ATCTCATGGC GCTGAACCGT TGACCATAAT TCATCCTAGT CAGGGTCCCC CACTTTCAAG ATCAGCTGCG GATGAAGCAG CACTGGCCGC CCTTGCCGCC GCACAGGCTA GAGAAAAGCA GCTTTTGGCA GACATGGAGC AGATGAAAGA GCGCTTCTCC AAGCTGTTGC TGGGAGAGGA CAATTCCGGT GGAGGCAAAG GAGTATCATC TGCTCTCGCC CTTTCAAACG CAATCACAAA CCTTGCAGCT TCCGTGTTCG GAGAGCAACG TCGCTTGGAG CCAATGCCTG CAGAGAGGAG AGCCAGATGG AGAAAAGAGA TCGATTGGCT TCTCTCCGTG ACCGAGTACG TTGTTGAGTT TGCTCCATCT CAGCAAAAAA ATAAAGATGG GACCAATATG GAGATAATGA CCACACGCCA ACGTACTGAC CTCCACATGA ATATCCCCGC ATTGAAGAAA TTGGACGCCA TGCTCATCGA TTGTCTAGAA AATTTCAAGG ACCAAAGCGA GTTCAGCTAT GTCTCAAAAG ACTCCCCAGA CTCAGACGGT AAGAGAAACG ACGACAAATG GTGGATTCCG ACCGTCAAAG TTGCCCCAGA TGGTCTATCA GAAGCTTCAA GAAGGTTCTT GCAATACCAG AAAGATTGTG TAAACCAGGT TCTAAAGGCA GCCATGGCCA TAAACGCACA GGTTTTGTTC GAGATGGAGA TACCAGAGAG CTACATCGAC TCTCTCCCCA AGAACGGGAG GGCGAGTCTC GGGGATCAGA TGTACAAGAA TATAACGGTG GACTTCTTTG ACCCGGACCA GTTCCTGAGC AGCATGGACA TGTCGTCGGA GCACAAGATC GTCGACCTCA AAAACAGGAT CGAGGCATCA ATCATTATAT GGAAACGCAA AATGGTTTAT AAAGACAGCA AATCATCGGC ACCATGGGCC TCCGGAGTAA GTCTGGAGAA GCGAGAGGTT TTCGAGGAGC GAGCTGAGAC CATTTTGCTC ATTCTCAAGC AAAGATACCC TGGGATATCT CAGTCGGCAC TCGACATCAG CAAAATCCAG TTCAACAAGG ACGTGGGTCA AGCGGTGCTG GAGAGCTACT CGAGAATACT GGAGAGCTTG GCGTACACGG TACTGTCGAG AATCGATGAC GTTTTAGAGG CAGATCGAGC GGGGAGCAAG AGGAACACGC CGATGGAATC AGAGGACGAG ACGCTGGTTG GGAGCATGAC GCTGTCGGAT TTCATGGGAT GGGACTTCGA TCAGGCCGGG AACGCCGACT TGGAGTCGAA GAGGGATCTA TCGGATGATC CGTTGGTGAA GGAGAAGCTA AGCGTCGTCA CGACCAAGAA GACATCATAC CTCGAAACCC TAGGCGGCGT CAAGAGTCCA ACGGCGCGGC ATTGATAAAA GATCGAAGAC AGATTTA |
| Length | 1647 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 18172594.. 18174609 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G79860.1 |
| Description | RHO guanyl-nucleotide exchange factor 12 |
| TAIR curator summary | Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth Growth. |
| Alias | [ATROPGEF12][MEE64][ROPGEF12][MATERNAL EFFECT EMBRYO ARREST 64][ROP (rho of plants) guanine nucleotide exchange factor 12] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.83095 |
Ahg487745 | NAC domain containing protein 82 |
| 32.9848 |
Ahg470110 | SIGNAL PEPTIDE PEPTIDASE-LIKE 4 |
| 37.0675 |
Ahg488149 | |
| 40.025 |
Ahg494092 | Cysteinyl-tRNA synthetase, class Ia family protein |
| 40.3485 |
Ahg312939 | RING/FYVE/PHD zinc finger superfamily protein |
| 57.3498 |
Ahg471021 | Metallopeptidase M24 family protein |
| 59.3296 |
Ahg474056 | Complex I subunit NDUFS6 |
| 62.1289 |
Ahg484007 | glutathione peroxidase 4 |
| 62.498 |
Ahg318122 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 73.885 |
Ahg311923 | F-box family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|