Detail



ID : Ahg477443

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477443|fgenesh2_kg.3__144__AT3G02140.1
Sequence
AAAAATTGTT TCGTCTCTCT CAAGATTGAA AATAGAAAGT TCAGCCTAAA ACGTTTCTCC CTTCTCTTTC GAATTTCTCT GACTTCGATA TTTTTGGTTA TGGAGATGAT AAGAGGCAGG GGAATCCCAA ACGGCGTCGT TCAAGTGCCG AATCTTTCTG CTAATAATCT CTTGCAGAAG TTTTTCATCG CAAGCAACCA TTTTTGTCAG CTAGACTCTG AGCCTGGTGA GAGTCGAGAA GAAGCAAAGA AGAAAGAAGA TGAAGCAGAA GAGGATGAGA AAGACGTGGA GCTAACGTTA GGTCTTTCGC TTAATGGACA GTTTGGTACG GATCCGAGAT CGAGGAAAAG GAAGAACTTT GATCTCGGTC GATCTTCTTC GATACCGGAA GGTTTTTTCT TCGATGAACA AAGATCCGAT GGAGGCTCAG ACATGTTCCA GCTGGATCGT ACGCGTTCTC TGCCTGTCGT AACGGAGTTC GAGATAGACA AGGAGACGGA GAGGAAAAGG AAACGACCGG AGAAGACGAG GGCATTTATG GAATTTCCGG TTACAAACAG AGGAACATAT CTCACAGAAG ATAAAAACAG AGGCCAAGTC GCCGAAACAG AGAAGGCGAG GGCATTTCTG GAATTTAAGA TTCCACCGGG CAAGGAGGGA AAGGAAGATA AAGATCGTTT TGTTGTCACT AGTCCGGTCA AGGGAAATGG TAAAAATGGA AATACGGCGA AGAAGAAGAA GAATGTGGAA GTTTCAGGAA TGGAGAAGGC GAGGAACATT CTAGAAGACA TGCCGTGTGT GTCGACGAGA GATGTCGGAG CCGACGGGAA ACGAGTGGAA GGGTTTCTTT ATTGGTACGG AGGGAAAAAG GAGGAGGTCA GGATAGTCTG TGTTTGCCAT GGTAGTTTTC TTTCTCCGGC GGAGTTTGTT AGGCACGGCG GAGGTACCGT CAGCGACGAC GGTGGTGGTG ATGTTATGAT TAACCCTCTT AGACATATTG TTGTTAAACT TCCTTCTTCT TCCTTGTAGT CGATCTAGGG ATTATTTATT TATCCCCAAC TATATATTAT TAGAGGTCTC ATTTTTTTTT TTCTCAATTT TCAAAGTGTA ACGATGTCAA AATAATTTGA CCGACGACTA AGCTGAAGCA TGTACATTTG AT 
Length1162
Protein Sequence
Protein Residue
Map Locationscaffold_3: 439305.. 440479
Download Sequence
A.thaliana
AGI-codeAT3G02140.1
DescriptionAFP2 (ABI five-binding protein 2) family protein
TAIR curator summaryEncodes a protein that acts in the nucleus and is an important negative regulator of ABA and salt stress responses, and could play a critical role in controlling root elongation, floral initiation and starch degradation.
Alias[AFP4][TMAC2][ABI FIVE BINDING PROTEIN 4][TWO OR MORE ABRES-CONTAINING GENE 2]
Gene coexpression
MR
MR Locus Description
6.16441 Ahg475964
6.9282 Ahg474041 Adenine nucleotide alpha hydrolases-like superfamily protein
7.07107 Ahg479964 heat shock transcription factor C1
9.05539 Ahg947850 cycling DOF factor 2
12.6095 Ahg941394 beta-amylase 3
14.6629 Ahg928623 exocyst subunit exo70 family protein H4
15.3623 Ahg492675 Protein of unknown function, DUF584
19.799 Ahg476776 Arabidopsis protein of unknown function (DUF241)
21.9317 Ahg474062 RING/U-box superfamily protein
23.1084 Ahg338119 Disease resistance protein (CC-NBS-LRR class) family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression