Detail



ID : Ahg477473

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477473|fgenesh2_kg.3__174__AT3G02400.1
Sequence
ATGGTTCCGC CATTGCTGAA GCTTGACTTC ACCCAGGGTC CAAGAGCTGG CGATTCTCTA GGGTTTAAAC CCGGATCCAC TATCCGGATC GGTCGATTCG TCCGTGGTAA TGAAATCGCC ATAAAAGACG CTGGAATCTC TACCAAGCAC CTCCGGATCG TCTCCGATTC TGAGAACTGG ATAATCCACG ATCTTGGGTC TTCCAACGGC ACCATATTGA ACTCGGAGAC TATTGACCCA GATACGCCCA TCAATCTTAG CCATGGAGAC GAAATTAAGC TTGGTGAGTA TACTTCCATT TTGGTGAACT TTGTGAGTGA TGTTGTTCAG GCGCCGCAGG AGCATAAGCT TCCGCCCAGG CCAAGGAGGA ACAACAAGCG TCTTGCTGTT TCGGATCCGG ATCCTATTGA GTCGGTTCAG GAGAAACCAA AGCGCACGCG TGGATCGTCG AAGCAAGAGG AAAATGAACT GCCCAAGATA ACTAGGGCTT CGAGGAAGAA GACTCTGGAC GATATCGCCG ATAAAGAAGA GGAATTGGAG GTGGAAATTG AGAAGAAAGT CAAATCTAGG GTTGGGAGGC CTCGGAAGAA CGCAGGCAGT GCAGTTACGA AGGAAGAAGA AGTTGTGGAG GAGAAAAAAG GCAACTCTAG GGCTCGGAGA GGTAAGAACA CTGAGAGTGT GCAGAAATCA ATCAAATTGG AAGTTGAGGA TACTCCCAAG GCAGTGGAAA TCTCAGAGGT CAAAAGCAGG AAGAGAGTGG CAAGGAGCAA GCAGATTGAA AATGCCTGTT TGGGAATGGA GGTTAAAAAT GAGATGAGAA CTACTAGGTC TACCAGAAGC AAGAAGACTG AACTTGGTGG AGATTCTTTT CTGGAGTTGG AGATGGTCCT GAACCAAGCC CGGAAAAGCC GTGCAAAGAG GAAGAAAGTG GATCAGGAGC CGTCCAAGGA AACTATAAAT GATGATGCCG GAGAAGAGGT TTTGGAGAAC TGTCATGTTG AAGAAGATAC TGAAAATGAA ACTCAGGAAG GTTGCAGTGA AAGAAGTGAT GACAAATGTG ATAAAGAAGA TGAGAGGGAA GGTGATGGAT CTAAGAGGGT CGAGCAGGTG GAAATTGAGT TAAGGAAGAA GAGCACATTA GTAGAAGATG GCCTGAACTG TACTGCTAGA GAGGATGGAG AGACAGAGAA CTTACAAGAT ATTGAAGAAG AAAATGATAA TGAAAAAGAA AATGGACACG AAGAAGGTTG CAGTGAAAAA TGTGATAAAG AAGATGAGAG AGTTGGTGAT GGGTCTAAGA GGGTAGAGCA GGTGGAGATC GAGTTGAGGA AGAAGAGCAC CTTAGGAGAA GATGACCTGA ACTGTACTGT TAGAGAAGAT GGAGAGACAG ACAACTTACA AGAAATTGAA GAAGAATGTC ATGAAAAGGA AAGTGAGTGC AAGGTCGAGG AGGCTGGAAT TGCGACATTA GATGAGGAAA AGGTTGAGCA GGGCTGGAGC AATAAGAATG TAGAGAGGGT AGAAGTAGAT TTAGGAAAAA TGAAACTAAG AGATTGGTTT GAGGCCATAG AGGTTCAACT GCCAAAACAG ATAATTGAAG AGACAGAGAA GATGATAGAG CCCATGAGAA GTAAGAGTAT GAGAGTTCAC AAGCATATTG CAGAGCAAAA GGAAAAGGGC G 
Length1681
Protein Sequence
Protein Residue
Map Locationscaffold_3: 546098.. 548117
Download Sequence
A.thaliana
AGI-codeAT3G02400.1
DescriptionSMAD/FHA domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg486257
10.9545 Ahg474886 methyltransferases;copper ion binding
13.6382 Ahg908125
13.6748 Ahg478482 DnaJ domain ;Myb-like DNA-binding domain
17.6635 Ahg488536 SART-1 family
18 Ahg898127
19.5959 Ahg483124 PRP38 family protein
22.1359 Ahg474572
22.2711 Ahg343817 Protein of unknown function (duplicated DUF1399)
23.6643 Ahg494293 RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression