Detail



ID : Ahg477928

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477928|fgenesh2_kg.3__629__AT3G06290.1
Sequence
ATGGCGTTTA GGCCTTTCGG GAAGGACGTA GGTCCGTCGA TGAGTTCCAA GCCATCGCCG TTTACACCGT TCGGTGCTTC TGCTCCCACT AGGTTTGTAC TCTTTCTTTT AATACTAACA CTGCGAGTTT TGGATTTTCC TTGTAGTGAT TCTCCAATTC AACCACCGTC TTCTCAAAAC CCTTCAGCCT TAGCAGGACA ATCTTTTGGA CCAGGTGGAA TTCAAAGTGG TCCTCCAGTT CAGCGAGCAC CACCTCCTTT GGCTTCTCAA AACCCTCCAC CCTCTATAGG GAAACCTTAC CGACCAGGTG GGGTTCAAAG TGTTCCTCCA ATTAATCGAA CACCATCTCC GTTGGCTTTT CAAAATCCCT CACCCTCCTC AGGACAACCT TACCAACCTG GTGGAATTCA AAGGTTCCCA GAACCTTTCA ATGGAATAGC ATGGGGTTCA GAAGCTTTTC CACGTCCAAG CCCCTCTGTG AGACCTTACC AATTTCCTGG AGTTCAAAGG CCTGCTTTAA ATCCTCAATT TGGGCACGAT GGATCAAGGA ATTTCTTGAA AGATCATGGT GAACATAGTC GAGCCACATC TCCACCTGCT ACATCTCACA TTCTTTCCAG AATGGGAACT GATGCTGTTG AGATAGGTCG ATCACAAGAT TCAAAAAGAA AAAGTCGGTC AGATATTCTT CCGGATCAGA CTATGGGGTT TTCTAGAAGA AATCAATCGC CAGTATCAGG TTTTGAGAAT GGGAACTTGG TAGATGGTTT TCAGCCACCT TCTAGCCAAA CTTGGATGCG CTCTCTGTCT TCTGCGGAGA ATAATCCCGT GAGGTCGAGG AGCAATCCCA ATCGGTTGAT TCATCAAGAA CAAACCCGAA ACTCGCCATT CCCCTATGCA CATGAAGTAG CTGAAATTCA GGAAGCTACA AGAAGAAAGT CTTCGGCTAT AGCACCTTCT GATAAACCCC TCGGAGATGA CCCCATATTG TCTCAACATG ACTCTCAAAG GTTTTCGACA TCTCCTCCTA CGTCAGGCAC AAAGACATAT ACGCTTTCAA GAAGTTCAGA TTCTCAATTT CCTGGGCAGC CCTCCTCTCT AAATAGTTTC AATAATGCGG GTAAGACAAG CAGTTCACCT GCAACAAAAA GGACGAGATC TCCACCTGTA TATCCAGTTG AAGAGGATAT CCAGCGAAAC TCTTTTCCTT CTCAAGATTG TACGGAAGGA GAAGAGCAAG CCAGGGCAAA GAGACTGGCC CGCTTCAAGG GTGAACTGGA GCCTATTGCA GACCGACCTG TTGATACTCA ACTTACTAAA TCACCTGTAA ATAAAACTAT GAAGCCTCTG GACAACAAAC AAACATTCAA TTCACTTGAA TCAAGTAGGG ATGCCCTGAA GGGAGATGCC TTGCCTGATT ATGAAAGCTC GGAGCAGCCC TCTCTTATCA TTGGATTATG CCCTGACATG TGTCCTGAGT CAGAACGGGG GGAGCGTGAG AGGAAGGGTG ACTTGGACCA TTATGAGCGT GTGGATGGAG ATAGGAACCA GACAAGCAAA TCCCTTGCTG TGAAGAAATA TACTAGGACG GCGGAGCGAG AAGCAATTTT GATACGACCA ATGCCAATCC TGCAAAATAC AATGGAATAT TTGCTGAGTT TGCTAGACCG ACCTTACAAT GAAAACTTTC TTGGCATGTA CAATTTCTTA TGGGATAGGA TGAGAGCTAT TCGTATGGAT CTAAGAATGC AACATATTTT CAACCAAGAA GCTATTACTT TGCTGGAGCA AATGGTTAGA CTTCACATCA TTGCAATGCA TGAACTATGT GAATATACGA AAGGAGAGGG CTTTTCGGAG GGGTTTGATG CACACCTGAA TATTGAGCAG ATGAACAAGA CATCTGTTGA GTTGCTTCAA ATGTATGATG ATCACAGGAA GAAAGGAATA ACTGTTCCTA CAGAAAAAGA GTTTCGTGGC TATTATGCCC TTCTCAAACT CGACAAACAT CCGGGCTATA AGGTTGAACC TTCAGAACTT TCTCTTGATC TTGCCAATAT GACTCCAGAA ATAAGGCAAA CTTCAGAAGT TCTCTTTGCC CGCAATGTAG CCAGAGCTTG CAGAACTGGC AACTTCATCG CCTTCTTTCG CCTTGCACGG AAAGCAAGCT ATCTTCAAGC ATGTCTAATG CATGCTCATT TTTCGAAACT AAGAACTCAG GCACTTGCCT CTCTGCACTC GGGTCTCCAA ATTAATCAGG GTCTCCCAGT TTCAGATACG TCAAAGTGGA TAGGGATGGA GGAAGAGGAC ATAGAAGCCC TGTTGGAGTA CCATGGGTTT TCGATAAAGG TGTTTGAAGA GCCATACATG GTAAAAAATG ACCTATTTCT CCATGCTGAT AAGGATTACA AAACAAAATG CTCAAAACTT GTTCACATGA AGAAGTCAAG AACCATAGTG GAAGATGTTT CTGCTCCCTC AGTAGAGGAA GATGTTTCTA CTCCCTCTCC ATTGCCTTCC TTGATCACAG AAACAACTAA CAGAAATCAA CAGTGTATTA CCGCCCATAA ACAGGAAATG CCGCCTGCCA GAAGTCTTAA GAAACAAACA TCAATGCGTC TATTTGATAA AGAAATGGCT GACTCCAAGA CTTCCCTCTC ACCAGAGGAG GACAAGCCAG TGAGGCCATT TATTATAAAT CCAGCAGGGC CATCCTTTAT AAATCCAGTT GTGCATCAAC AGAAACAAAA TCACCTTACA TCAGCTGGTG GATTTCATTC TCCCGTGAAG CTATATTCTC CTATTGTTTC CCCTAGATTT CCTCAAACTA AATCCTTGAA TTTGGAGAAA CAACCTAATG ACGGTCGCAT TGGTATGTCT CCTGGGGAAA TTAAATTTCC ATTTGCAGGG GATGTACATA CGAATCATGT GCCTGGACCA GCTTTGCAAC AAAGTCTGAA GTCTATGCCA ATGGAGATTA TGCCTGTAAC TACCATTGCA GAGTCTCCGA CTGTAGAAAA CAAATATGCT TTGGAAGAAT CCGTACCTGA AGCTGCAATT ATTTGTACCT TGGAAAAGGA CTTCCATGAC ATTGACCAGG AAGATGAGGA TGAGAATGGG GTCATCTTAA ATCAGTATGA TGAGGAAGTG GCGAAGGCAA AACTCAAGTT GATAATAAGA TTATGGAAGC GGTGGTCTTC ACGTCAAAGT GAATTGCGGG AGCGTCGACA GTTAGCAGCA GCTGCTGCAC TGAATTCACT ATCCCTGGGT ACTCCTATCC GATTTAGCAA AACTGAGCAA TCAAGGGCGT GTGGTGAGTT TAACATTGAT CAAGCCATGA AGAGGAGATT TGAAGAACAC GAGAAATCAT GGTCAAGGCT GAATATTTCA GATGTGATAG CTGATATACT AGTTGGAAGG AATCCAGAAT CAAAATGCAT ATGCTGGAAG GTCATCTTAT GTACTCAGAC TAAATCAGTA AACACAGCAT CTTCTGCAAG TCAGGTTACA CATTCAGCAG CCAGTCGATG GTTATCATCA AAGCTTATGC CTCATGCAGA ACATAGTCTC AATGATGATA ATCTGCTGTT TTCAGCTCCC GGTGTGTCGG TATGGAACAA ATGGGTTGCA AATGGGTCTG ACATAGATTT CACATGCTGT CTCTCAGTAG CTAGAGATGT GGAGGCTGAG AATGATATGT GTGAAACAAC ATGTGGTGCA AGTGCAGTCC TTTTCCTTGC ATCTGGAGGC CTCCCTTTAA ATCTTCAGAG AGAACAGCTT AACCGCATTC TTGAATCAGT ACCCAACGGT TCAGTTCTTC CCCTTCTCGT AGTAATCAGC TCATGCAATG GGGAACATAC GGAGCCTGAT ACCGATCTCG TCTCGGGACT AGGCCTCCAT GATATTGACA AGTCAAAGAT TGCAAGCTTT TCCATCGTTT CTATTGCTAA TAAGTCGCAA AAGGGGCAGG AAGTTCGTTT TTTCAACGAT TCACGGCTAA GAGATGGGAT TAAATGGCTG GCGAGCAATT CACCACTGCA ACCAAATCTT CATCATGTTA AACCCCGGGA ACTGGTTCTG ACTCATTTCA GTTTTTCCCT GGAGTTGCTT AAGCAGATGC CAGATCAGGA GGTTGGTCCT AACATCTGCA TATCAGCCTT CAACGACGCA TTGGAAACAT CACGAAGAAA CATCACTTCT GCTGCTGAAG CAAATCCAAT CGGTTGGCCT TGCCACGAGA CGAAGTTGCT CGAGGATAAT AGAAAAGAAC GTTTAATGGT GAAGCGGTAT CTTCCCAACC TGGACTGGAG CAGTGCAGAG AACGTCGAAC CACTCAACTC CGTGCTAGAG AATTGTAAGC TCCCATATTT TGAAGATGAT TTGACATGGT TAACCGTAGG ATGTGCTTCT GGTGCTGAGA TAGAGAACCA TACGCAACGG CTCGAGGGAT GCTTAGTTGA GTACTTAACA CAGAGAAGCA ATCTTATGGG AGTCTCATTA GCTACCAAAG AAACAGGAGT GATGCTAGAA AGAAACACTA GACTCGAACT CCATAACTCA AGCCGCTACC ATATCATCCC AAGATGGATT GGTATCTTCC AGAGGATCTT CAACTGGCGG ATAATGGGTT TGTTTGATGC ATCGTCTTCC TCAGCTTACG TACTGAAGTC TGATCTCACC ATGTCAACTT CAAGCTATGC AGATAAATTC TTGGCTGAAG ATGCATCATA CCCATCTTCT CGTCCAAATC TTCCATTGCT TCATGAAATG ATACAAATCA GCTGCAGCCC CTTCAAGTCG TCTCCTCGAT ATGATCACAA AGCCCAGAGA GTTGTCGAAT CGGTTGAGAC AGAAATGGTC ATCGATGATC ATAGAGATAT AGACGAGTCT ACTTTGGAGA AGAGCAGCGA AGCTTATAGA GGGACGGATC TGATGATAAC TGAGGATGAT GAGTTAGCCG ATGGAACCGA TAGATCATGG AGAAGTAAAG GTAAAGAAGC GGCAGAGAAG AAGACGATAG AGAAGCGAGA GAGTGAGAGA TTAGATGAAT TGTTGGAGAA ATGTAACTTG GTACAGAGTA GCATAGCCGA GAAGCTCTGT ATTTACTTCT GATTTTCTTC AACCCTTT 
Length5128
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2379484.. 2387709
Download Sequence
A.thaliana
AGI-codeAT3G06290.1
DescriptionSAC3/GANP/Nin1/mts3/eIF-3 p25 family
TAIR curator summary
Alias[AtSAC3B][SAC3B][yeast Sac3 homolog B]
Gene coexpression
MR
MR Locus Description
10.198 Ahg922878 SEUSS transcriptional co-regulator
10.9545 Ahg492146 Sucrase/ferredoxin-like family protein
11.4891 Ahg485358 casein kinase II, alpha chain 2
19.2094 Ahg314752 histone mono-ubiquitination 2
24.9399 Ahg474459 phosphoenolpyruvate carboxylase 1
24.96 Ahg927990 Ankyrin repeat family protein
27.9285 Ahg476531
28.4956 Ahg488040 conserved oligomeric Golgi complex component-related / COG complex component-related
28.9828 Ahg470813 ER-type Ca2+-ATPase 1
35.5106 Ahg488817 ARM repeat protein interacting with ABF2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression