Detail



ID : Ahg482714

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482714|fgenesh2_kg.4__1774__AT2G37220.1
Sequence
CATCTTATCT CCACTCTCAA ATCTTCTTCA CCCAAAAACC CCTATCTTCC CATGGCTGCT TCAGCTTCTT CTCTCGCTCT CTCTTCCTTC AACCCTAAAT CTCTTCCTTT CTGCGTCTCC AGACCAGCCT CCGTTTCCCT CTTACCTCCT TCCCTCTCCT TTAAACTCAA TTCCGACTCC GTTTCCTTCT CCATCGCCGG CAAATGGAAC TCTCCCGCTT CTCGCTTCGT CCGTAACGTT GCAATCACCT CAGAGTTCGA GGTGGAAGAA GACGGTTGCG CTGATGACGC AGCGCCACAA GAGCAATCTT TCTCTGCTGA CCTCAAACTC TTCGTTGGTA ACCTTCCCTT CAACGTTGAC AGTGCTCAGC TCGCTCAGCT CTTTGAGAGT GCCGGAAATG TTGAGATGGT TGAGGTAATC TATGACAAAG TGACAGGAAG AAGCAGAGGT TTTGGATTCG TGACTATGTC TTCAGTTTCT GAAGTTGAGG CAGCTGCTAA TCAGTTCAAT GGCTATGAGT TGGATGGTAG ACCTTTGAGA GTTAATGCTG GTCCTCCTCC ACCAAAGAGG GAAGATGGTT TCTCCAGAGG ACCTAGAAGC AGCTTTGGAA GCTCAGGTTC TGGATATGGA GGAGGTGGTG GTTCTGGTGC TGGTTCAGGA AACCGGGTTT ATGTTGGCAA CCTTTCTTGG GGAGTTGATG ACATGGCTCT TGAGTGTTTG TTCGCGGAGC AAGGAAAAGT TGTTGAGGCT AGAGTCATCT ACGACAGAGA CAGCGGGCGA TCCAAGGGTT TTGGGTTTGT GACTTACAGC TCTTCTAAAG AGGTCCAAAA TGCCATCAAT TCCTTGAATG GTGCTGATTT GGACGGCAGA CAAATTAGAG TCTCGGAAGC TGAGGCTAGG CCTCCAAGGC GCCAATTTTG AGCACCAATC TATGACTTCC TATTCTCAAA AACGCATATT CTTGAGGGCG CTTCGAAGCA AAGAGGGTTT GTGAGATGAT GGCAGTTTCA GACGGTACTA AGCTCTTAGC TTCGCCTATG TTTGTTGCCT TTGGATGCAC GAAGGTCGTA AAGGAATGGT CTTTTTTTTT TTGGGAAACG TATAATTAAG ATAAAAGCAG AGAAGACCAT GTTCTTGTCT GTCTGATTGC TGCCATTGAC TGCTTCGCTT TGGTTTGATT CAATTTTTTT TCTCTCTATT TCGTGGTCTT CATAATGCTT CTCTGTTTAT TTGATCCTCT GCTCAAATGA ATGAATATGA TGAACACACT TGAAAACCGG TTAA 
Length1284
Protein Sequence
Protein Residue
Map Locationscaffold_4: 16867260.. 16869113
Download Sequence
A.thaliana
AGI-codeAT2G37220.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summaryEncodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg348440 chloroplast RNA-binding protein 29
4.12311 Ahg475075
4.79583 Ahg481876 thiaminC
6.9282 Ahg950127 thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4)
8.48528 Ahg486548 Transketolase
10.0995 Ahg946135 RAB GTPase homolog E1B
10.3923 Ahg326886 DEAD box RNA helicase (RH3)
11.225 Ahg928005
12.6886 Ahg481226 acetone-cyanohydrin lyase
13.0767 Ahg938119 chloroplast RNA-binding protein 33
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression