Detail


ID : Ahg478654

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478654|fgenesh2_kg.3__1355__AT3G12920.1
Sequence
GCTTTGATAT TTGTTTTTTA GTTTCTCCCT CTATCTCTCT GCGAAAACCG TAATTAAACC CCCCCACAAC ACATCCTCTT CAACATAACT TCTTCTTCTT CCATCTTTCG TTGCTTTCAC GTTTTTAGAG GTTCTCTGAA TCACCCCCAT TAAAATAGCT TTGAACGAGT TTTCATAATA GTCAACAAAC AATGGCCGTT GAAGCTCACC ATCTTAATCC TCTGTTTTCT TCCAACAGAG AAATGATTCA TCCCGTTGAA GCAAACGGCT TAGTCTATAA CACCCAGATG AGATACGGCA CCGTTCCGAC GTTTAACCCT ACTGTAGAAT GTCAAACTTC TCTGTTTAAT CCAATCTACA ACATCTCACC AGTTGATGGT TTGGTTCATC AATCCATGAA ACCAACGATA CAATCCGTTG ATAGTTCTGT CACATTCAAC AGCGAGAACG ATTTTCTTCG TCCTGTGTCG TCGAGAAAAC GTTCTAGAGA AGAATCTGTT GTTTTAAATC CTTCCGCTTA TATGCAAAGC CAGAAAAATC CCACGGATCC TCTCATGTTC CTTGGCCAAG ACTTGTCTTC TAACGTCCAA CAACATCATT TCGATATCGA TCGTTTGATC TCTAATCACG TTGAGAGAAT GAGAATGGAA ATTGAAGAGA AGAGAAAATC ACAAGGGAGG AGGATAGTGG AAGCCGTGGA ACAAGGTTTG ATGAAGACAC TAAGAGCCAA AGACGAAGAG ATAAATCACA TCGGGAAACT AAACCTATTT CTAGAAGAGA AGGTCAAGTC TTTGTGCGTA GAGAATCAGA TATGGCGTGA CGTGGCACAG TCTAATGAAG CCACCGTAAA CGCCCTCCGT TCCAACTTAC AACAAGTTCT CGCTGCCGTT GAGCGTAACC GGTGGGAGGA GCCGCCCACG GTGGCAGACG ACGCGCAGTC TTGTTGCGGT AGCAACGACG AAGGTGATAG CGAGGAAGAG CGGTGGAAGT TAGCGGGAGA GGCGCAGGAT ACGAAAAAGA TGCGTAGGGT AGGGATGAGT ATGTGTAGAA GCTGTGGGAA AGGAGAAGCA AGTGTGTTAC TGTTACCGTG CAGACACATG TGTCTATGTA CTGTGTGTGG TTCTTCACTC AACACTTGTC CCATTTGTAA ATCTCCAAAG AACGCTAGTC TACATGTTAA TCTTTCCTCT TAGTATAACC CAATACCAGT AAAATTGTAT ATGTCCCAAA AAAAGTAAAT AGTAGAAAAA AGTTCCTTGG TTGAAAGAAA ACTGTTCATT CTTTTTTTCT CTCGTCTTTG GATTGTGATG ATGATGATGG AACACGAATC TTTGACATAT GTGTCAGATC TTTAAATTTC GTAAGGGGTT CACGAGGGAC CTCTGTTGCT AAAAATCGTG GGTTAGGTTT ATACCCACTT TCAATGTCAT TTCCCATCTT TGTATG
Length1446
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4899857.. 4901491
Download Sequence
A.thaliana
AGI-codeAT3G12920.1
DescriptionSBP (S-ribonuclease binding protein) family protein
TAIR curator summary
Alias[BRG3][BOI-related gene 3]
Gene coexpression
MR
MR Locus Description
27.4955 Ahg488253 isopropylmalate dehydrogenase 1
36.6606 Ahg471358 Vacuolar calcium-binding protein-related
40.5956 Ahg492886 phloem protein 2-A1
45.2769 Ahg950898 myb domain protein 28
56.8683 Ahg476964 Protein of unknown function (DUF581)
58.1034 Ahg950003
59.4475 Ahg895882 TRAF-like family protein
74.3303 Ahg927551 aspartate kinase 3
76.6812 Ahg496693
79.4229 Ahg493941
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression