Detail



ID : Ahg496693

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496693|fgenesh2_kg.8__2509__AT5G64770.1
Sequence
TATATAACCA AAGAAAAAAA AATCTCTTCC AAAAATGGCA ATTAGGGTTT CCTACAAGTC TTTCCTCGCC GCAGTTCTTC TCATACTCTT CATTTGTTCT CCTACTCAAG CACGAAGCTT ACGAGAAATC GTGAGGAATA GAACGCTATT GGTTGTGGAG AAGGGTCAAG CGAGTCGGAA AATAAGGCAC GAAGGTGGAG GAAGTGATGT TGATGGATTG GTGGATATGG ATTATAATTC TGCGAACAAG AAAAGACCAA TACACAATCG CTAATAAACA CACATGAGAG CTTATCGAAT TCTTGTGAGA TATCCTGAGA TCCAAAGATA TCCCGAGATT TTATCTTTTA CGAAACATAA ATTATAAGAA GTGAGAATGT ATTATATATT TAAAAAAAAA AAAAAAAGTG AGAATGTAAA ATAATATTTA TATGAACATA TAAATATAGA CGACTTTGTA TGCATATGTG TACAGTCTTA TCTCGAGAAA AAACCGTTTT ATATAATAAT CATAGCTTGT GTGTGTTTTA TGTAGAGTAT GGATTGCATC ATGGTTTTCT GTTTGTGAAA TAAAGGTCAA TAATATATTA 
Length590
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20344770.. 20345508
Download Sequence
A.thaliana
AGI-codeAT5G64770.1
Description
TAIR curator summaryEncodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).
Alias[CLEL 9][GLV2][RGF9][CLE-like 9][GOLVEN 2][root meristem growth factor 9]
Gene coexpression
MR
MR Locus Description
6.7082 Ahg483830 cytochrome P450, family 78, subfamily A, polypeptide 6
8.7178 Ahg925873 BURP domain-containing protein
10.0499 Ahg926058
11.4891 Ahg483019 Subtilisin-like serine endopeptidase family protein
14.9666 Ahg929873 branched-chain aminotransferase4
16.7332 Ahg473472 UDP-Glycosyltransferase superfamily protein
17.3494 Ahg476384 Protein of unknown function (DUF1677)
26.2679 Ahg481853 NAD(P)-binding Rossmann-fold superfamily protein
27.7669 Ahg492324 Fe superoxide dismutase 1
27.9285 Ahg926059
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression