Detail



ID : Ahg479246

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479246|fgenesh2_kg.3__1947__AT3G17650.1
Sequence
GAGTCCAAGT TGACTCCTTC GAGCTTTGAT TCTCGTTCCA ATAATACTTC CTCCACCATC TCTCCTCCTC TCTTAGATCT AAGAAACAGA GAAAACAAGA GAGAAAGAAT GAGAAAGGGA GTTCTAACTC CTGACAGAGA TCGTCAGATT ATGGAACATG AGTTGCAGGA AACTGGTTTT AGTCCAGAAT CAGAGAAAGT CAAGAACAAG AATTTTGAAG AAGATGAAGA GGAAGAGGAT GAATCTGTGG AGAAGATCTT TGAGAGTAGA GAAGTACCTT CGTGGACGAA GCAGTTGACG TTGAGGGCTT TTGTGGTGAG CTTTATGCTA AGCATCTTGT TTAGCTTCAT TGTTATGAAG CTTAACCTCA CAACGGGAAT CATACCTTCG CTCAATGTCT CTGCTGGTCT TCTGGGTTTC TTCTTTGTCA AGACGTGGAC CAAGATGCTC CATAGGTCTG GTCTCTTGAA ACAGCCATTT ACTCGCCAGG AGAATACTGT TATTCAGACC TGTGTTGTTG CTTCTTCTGG CATTGCTTTC AGCGGAGGGT TTGGGACATA CCTCTTTGGC ATGAGTGAAA GAATTGCGAC CCAATCAGGA GATGTTTCTC GTGGCGTCAA GGACCCTTCT TTGGGTTGGA TTATCGGTTT CCTCTTTGTT GTCAGCTTTC TTGGCCTCTT CTCAGTTGTT CCCCTGAGAA AGATAATGGT AATAGACTTC AAACTAACAT ACCCAAGTGG CACTGCAACA GCTCATCTTA TCAACAGCTT TCACACCCCT CAAGGCGCCA AGCTAGCCAA GAAACAAGTG AGGGTGTTAG GGAAATTTTT CTCTTTTAGC TTCTTCTGGA GTTTCTTCCA ATGGTTCTTT ACCGGAGGAG AAAATTGTGG GTTCTCCAAC TTCCCAACAT TTGGACTCAA AGCTTACCAG TACAAGTTCT ACTTTGATTT TTCAGCAACA TATGTTGGTG TTGGAATGAT ATGTCCCTAT ATAATCAACA TCTCTGTCCT ATTGGGAGGA ATCCTCTCTT GGGGGATAAT GTGGCCCCTC ATTGAAACCA AAAAGGGAGA TTGGTTCCCT GATAATGTCC CATCCAGCAG CATGCATGGT CTCCAAGCTT ACAAGGTGTT TATAGCTGTT GCTATAATCC TAGGAGATGG CTTATACAAC TTTTGCAAGG TGCTGAGCCG GACTCTTTCA GGACTATTTG TACAGCTCCG AGGCCCTACT ACATCTATTT CAAGAACCTC CTTCACACTT GAAGAAGACC CTCATGCTTC CCCATTAAGC CCAAAGCAAT CTTATGATGA CCAACGTCGT ACAAGATTCT TCCTCAAAGA CCAAATCCCT ACTTGGTTTG CTGTTGGAGG TTATATCACA ATAGCTGCAA CATCTACAGC GATACTCCCT CACATGTTCC ACCAGCTGAG ATGGTATTAC ATTCTGGTTA TCTATATCTG TGCGCCTGTC TTGGCTTTCT GCAACGCTTA TGGAGCTGGA CTCACAGACT GGTCCTTGGC TTCAACGTAT GGAAAGCTTG CCATATTCAC AATTGGGGCT TGGGCTGGCT CTGAGCACGG TGGTATGCTG GCTGGTCTGG CAGCATGTGG TGTCATGATG AACATAGTCT CGACGGCTTC GGATCTGACA CAAGACTTCA AGACAGGTTA CCTCACTTTA TCATCTCCAA AGTCAATGTT TGTGAGCCAA GTGATTGGAA CAGCGATGGG TTGTGTGGTA TCTCCTTGCG TGTTCTGGCT ATTCTACAAA GCGTTTGATG ATTTAGGCCT CCCAAACACT GAATACCCTG CTCCATTTGC TACCGTATAT CGAAGTATGG CTAAACTAGG AGTGGAAGGT GTCGCATCTC TACCGAGAGA ATGTCTCGTT CTATGCTACG CGTTCTTCGG TGTGGCGATT CTAGTAAACA TAGTAAAAGA TAGTCTCCAG AGCCAATGGG GAAGGTTCAT TCCACTTCCA ATGGCAATGG CTATACCGTT TTTCTTGGGA CCTTACTTTG CAATTGACAT GTGTGTGGGA AGTTTGATAC TTTTTATCTG GGAAAGAGTA GATGCAGCCA AGGCTGAAGC TTTCGGGACA GCAGTGGCTT CTGGTTTGAT ATGCGGAGAT GGCATTTGGT CTTTGCCAAG CTCAGTGCTC GCTATAGCCG GAGTCAACCC TCCTGTTTGC ATGAAGTTTC TCTCTGCTGC AACCAATTCA AAGGTCGACA ACTTCTTACA AGGATCCACT TAAAACTCAA ATAAGTAACC ATATCTCAAG CATGTGAAAG TGTAACGATG CTTCAATTTT TCTTCTTTTA CCATTATGAC GATTTTGAAT GTAACTCGTA TATAAAGATC TTAGATA 
Length2367
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7091837.. 7094845
Download Sequence
A.thaliana
AGI-codeAT3G17650.1
DescriptionYELLOW STRIPE like 5
TAIR curator summaryArabidopsis thaliana metal-nicotianamine transporter YSL5
Alias[PDE321][YSL5][pigment defective 321][YELLOW STRIPE like 5]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg934330 ATP binding cassette subfamily B1
2.82843 Ahg950963 auxin response factor 2
8.48528 Ahg495275 RNA-binding (RRM/RBD/RNP motifs) family protein
9.11043 Ahg480822 heavy metal atpase 4
10.247 Ahg926134 3-ketoacyl-CoA synthase 6
12.49 Ahg322062 RNA-binding protein
16.9706 Ahg327070 cryptochrome 1
25.7488 Ahg492536 plasma membrane intrinsic protein 1;5
26 Ahg479762 FRIGIDA-like protein
29.1548 Ahg948444 conserved peptide upstream open reading frame 24
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression