| Annotation |
|---|
| Description | jgi|Araly1|495275|fgenesh2_kg.8__1091__AT5G52040.2 |
| Sequence |
TCTATTTTGT AGGAAACATG AAGCCTGTCT TTTGCGGGAA CTTTGAGTAT GATGCTCGTG AGAGTGATCT TGAGCGGCTT TTCAAAAGAT ACGGCAAGGT TGAGAGGGTT GATATGAAAG CTGGGTTTGC TTTTGTCTAT ATGGAAGATG AAAGGGATGC TGAAGATGCC ATCCGAGCGC TTGATCGCTT TGAATATGGC CGCACGGGAC GCAGACTCCG TGTTGAGTGG ACAAAGAATG ACCGTGGAGG TGCTGGAAGA TCAGGTGGTT CGAGGAGATC ATCGTCTGGC ATGAGACCTT CCAAGACTCT GTTTGTGATC AACTTTGATG CACAGAACAC TAGGACTCGG GACTTGGAGA GACACTTTGA GCCGTATGGA AAAATTGTTA ATGTTAGAAT CAGAAGGAAT TTTGCATTTA TCCAATATGA GTCACAAGAA GATGCCACCA GAGCACTGGA TGCTACAAAT TCAAGTAAGC TGATGGATAA GGTGATCTCA GTGGAGTATG CAGTGAAAGA TGATGATTCG AGAGGAAATG GGTACAGTCC TGAAAGACGG CGTGATAGGT CACCTGATAG GAGAAGGCGG TCACCTAGTC CTTACAGAAG AGAAAGAGGC AGTCCTGACT ATGGCCGAGG AGCTAGTCCA GTAGCTCACA AAAGGGAAAG GACTAGTCCT GATTATGGTC GAGGACGACG CAGCCCCAGC CCTTACAAGA GAGCCAGGCT TAGCCCAGAT TACAAGAGGG ATGACCGTAG GAGGGAGAGA GTGGCTAGCC CAGAGAATGG AGCTGTAAGG AACCGAAGTC CAAGAAAAGG ACGTGGTGAA AGCAGGAGTC CTCCCCCATA TGAGAAGAGG AGGGAGAGCA GGAGTCCTCC TCCATATGAG AAGAGGAGAG AAAGCAGGAG TCCTCCTCCA TATGAGAAGA GGAGGGAGAG ATCAAGGTCA AGGTCAAAGT CAAGCCCTGA GAATGGTCAA GTTGAAAGCC CTGGACAAAT AATGGAAGAA GAAGCTGGAA GAGGATACGA TGGTGCAGAC AGCCCGATAC GCGAGAGCAG CCCCTCTCGT TCGCCTCCAG CAGAGGAATG ATTGGAGATG CAGACAGATG ATTGTGTTGG ATTCACAAAC AAAAGATGTC TCTCAAAGTA GCTGTATCTG AACTCAAGTC TTTTGTTATG TCATGTTTAG TATTTTAGTG TGTTCCTTTG GGTCTTTCGT TAAGTGCTTT TGTAAACTTT ATTATGACTC CATTCGAAAT CGCTTGTCGT AGTATTGGTT AAAAAATTGC TTCTTATTTT GGATTACTCT ATATCTGACT TTAGATGTTT |
| Length | 1330 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 13997385.. 13999870 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G52040.2 |
| Description | RNA-binding (RRM/RBD/RNP motifs) family protein |
| TAIR curator summary | encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined. |
| Alias | [At-RS41][ATRSP41][RS41][arginine/serine-rich splicing factor 41] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.23607 |
Ahg481806 | CAX interacting protein 4 |
| 2.82843 |
Ahg928792 | Metallo-hydrolase/oxidoreductase superfamily protein |
| 4.24264 |
Ahg489410 | SPOC domain / Transcription elongation factor S-II protein |
| 5.2915 |
Ahg479130 | translationally controlled tumor protein |
| 6.48074 |
Ahg480944 | Arabidopsis phospholipase-like protein (PEARLI 4) family |
| 7.74597 |
Ahg490443 | |
| 8.48528 |
Ahg479246 | YELLOW STRIPE like 5 |
| 8.83176 |
Ahg476006 | little nuclei3 |
| 8.94427 |
Ahg486623 | brassinosteroid-responsive RING-H2 |
| 10.8167 |
Ahg475701 | ADP-ribosylation factor A1E |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|