Detail



ID : Ahg479461

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479461|fgenesh2_kg.3__2162__AT3G19450.1
Sequence
AAGAGGTTTG GTTGGTCGAG CTTACTGACT TAAAAAAATA CACATCCACC AAAAATTAAA ATAATGTATT CCATTTTTCC TCCTCTCTTT TGGTATTAAA TAAATCTCTT ATAATTTCCC CATTTGCTCT GTATATACAT ATGTCAATAG AGTGCCTCTA TAGTCATGTT TCCATAGACA CTCTTCAAAA CTAAAGAAAA CAAAAAAAAA TTCCGGAGAA ACCAAGAAAA CAAAAAATGG GAAGTGAAGG AGGAGAAAAG AAGGCTTTAG GATGGGCTGC AAGAGATCCT TCTGGTGTTC TTGCTCCTTA CTCCTACACT TTAAGGAGCA CCGGAGCTGA TGATGTGTAT ATAAAGGTTA TATGCTGTGG AATATGCCAT ACTGATATCC ACCAGATTAA AAATGATCTT GGAATGTCTA ATTATCCTAT GGTTCCTGGG CACGAGGTGG TAGGTGAGGT GGTGGAAGTG GGATCAGATG TGAGCAAGTT CACCGTAGGA GATGTAGTCG GAGTCGGCGT GATTGTCGGA TGCTGCGGAA GCTGCAAACC ATGCAGCTCA GAACTTGAGC AGTACTGTAA CAAGAGAATC TGGAGTTACA ATGATGTCTA CACCGATGGA AAACCCACAC AAGGTGGATT CGCCGACACC ATGATCGTCA ATCAAAAGTT TGTGGTGAAG ATTCCAGAAG GAATGGCGGT GGAGCAGGCT GCACCGCTGC TATGCGCCGG AGTAACCGTT TACAGTCCGT TGAGCCATTT CGGTCTAATG GCAAGTGGGC TCAAAGGAGG GATTCTAGGG TTAGGTGGAG TAGGACACAT GGGTGTGAAG ATAGCTAAAG CAATGGGACA TCATGTGACT GTGATAAGCT CATCAGATAA GAAAAAAGAA GAAGCAATGG AACATTTAGG AGCTGATGAC TATGTGGTGA GCTCTGATCC AGCAGAGATG CAAAGACTCG CAGATTCTCT TGACTACATC ATCGACACCG TACCTGTGTT TCACCCTCTC GAGCCTTACT TAGCTTGTCT TAAACTCGAT GGGAAATTGA TTCTCATGGG TGTTATCAAC ACTCCTCTTC AGTTCTTGAC TCCTCTCGTC ATTCTTGGGA GGAAAGTGAT ATCGGGGAGC TTCATAGGGA GCATTAAAGA GACAGAAGAA GTGTTGGCTT TCTGCAAAGA GAAAGGGCTT ACGTCGACCA TTGAAACTGT GAAGATTGAT GAACTTAACA CTGCGTTTGA GAGGCTTAGC AAGAACGATG TTCGTTACAG ATTTGTCGTT GATGTTGCTG GAAGTAACCT CGTGGAGGAG GCTGCAACAA CTACAAGCTA AAGAGGGCAA AATATTGTAA CGGGCCTGGT AGGTCCAACG AATGTTTTGT TGTGTCTTTT TTTCAAATGG TTCAAAAACG AATGCTTTGG TTTT 
Length1424
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7921257.. 7923552
Download Sequence
A.thaliana
AGI-codeAT3G19450.1
DescriptionGroES-like zinc-binding alcohol dehydrogenase family protein
TAIR curator summaryEncodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates.
Alias[ATCAD4][CAD][CAD-C][CAD4][CINNAMYL ALCOHOL DEHYDROGENASE 4]
Gene coexpression
MR
MR Locus Description
18.9209 Ahg938360 Eukaryotic aspartyl protease family protein
28.6356 Ahg476393 germin-like protein 1
33.5857 Ahg930186 cell wall-plasma membrane linker protein
34.3948 Ahg482072 genomes uncoupled 1
36.3318 Ahg492226 NFU domain protein 3
38.0526 Ahg327641 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
39.4208 Ahg483684 FASCICLIN-like arabinogalactan protein 8
41.5331 Ahg489037 YGGT family protein
44.1814 Ahg470791 Leucine-rich repeat transmembrane protein kinase
46.2817 Ahg929096 Protein of Unknown Function (DUF239)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression