Detail



ID : Ahg492226

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492226|fgenesh2_kg.7__1659__AT4G25910.1
Sequence
AAATCATCTC CAAGACGTAT CATCCATCAT CATCCACCAA TGAAAAGTTC TGTCTTTTTT TCCTACTCTG TTCTCGGCCC AGATTTTCCT GGGAAAAAAA AACTCAATCC ACCCGAATTC CCCAAATCTT CATTGTTTCA GGAAATTTTC TCGATCGTGA AGCAGAAAAG TGAGGATCCA AATGGGTTCG GTTTCGGGTC AAACCCGAAT TACAACGATG AACCTCTCGC TCTCATCAGC AGATAAGAAT CCTAATTTCC GCTTATCGCT TCTAAATTCG AAGAACGCAA TTTCAGATAG TTTAGGAGTC TCTTCCAAAT GCAGTACATT CCTCAGGGGT CAATTTCAAA GAATACATTT TTCTTTAGTT CAACACACTC GACCTTTGAG AACACGATCA CGAACAGTAT TTGGTCACGT GAGCTGCGTC ATGCCGTTAA CGGAAGAGAA TGTGGAGAGA GTGCTAGATG AAGTACGACC ATCTTTAATG GCTGACGGAG GAAACGTGGC GCTGCACGAA ATCGACGGAC TTGTGGTTGT TCTAAAGCTA CAAGGAGCTT GTGGCTCGTG TCCTAGCTCG TCAATGACAT TGAAGATGGG AATCGAGAGT CGTCTTCGAG ACAAGATTCC AGAGATCATG TCCGTTGAGC AGTTTCTTGA ATCCGAGACT GGCGGGTTAG AGCTGAACGA TGAGAACATT GAAAAGGTTC TCTCTGAGCT AAGGCCGTAC CTATCCGGTA CGGGAGGTGG GGGGCTTGAG CTGGTTGAGA TTGATGGTTA CGTGGTTAAG GTTCGGCTCA CTGGACCAGC TGCTGGAGTC ATGACTGTTC GTGTCGCGTT GACTCAAAAA CTGAGGGAAA ACATTCCTTC TATTGGTGCA GTCCAGCTTC TAGAGTGACA TTAACCTTTT TTATTTTGTA ACTTCTTCTA TTCATCTACA AGGCCTATTT TTGATTCTAT ATATTTTATT TCCAAATTCT AGAATTAGTA CAATTAATAC AATGACC 
Length1007
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6420191.. 6426195
Download Sequence
A.thaliana
AGI-codeAT4G25910.1
DescriptionNFU domain protein 3
TAIR curator summaryEncodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU1 and 2 than to NFU4 and 5. Targeted to the chloroplast.
Alias[ATCNFU3][NFU3][NFU domain protein 3]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg484645 ATPase, V0/A0 complex, subunit C/D
24.2899 Ahg496860 Phototropic-responsive NPH3 family protein
32.187 Ahg490158 Inositol monophosphatase family protein
35.3695 Ahg476441 P-loop containing nucleoside triphosphate hydrolases superfamily protein
36.3318 Ahg479461 GroES-like zinc-binding alcohol dehydrogenase family protein
40.9634 Ahg485688 Cytochrome P450 superfamily protein
42.9884 Ahg479972 plastidic type i signal peptidase 1
43.8178 Ahg478348 lycopene cyclase
52.192 Ahg938626 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
56.745 Ahg931833 arginine decarboxylase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression