Detail



ID : Ahg480310

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480310|fgenesh2_kg.3__3011__AT2G13560.1
Sequence
CTTTCTTTCT TCTCCAGCCA GATCGGAACA ATCCTCGCAA TAGATTCCGA TTAACGATGG GAATAGCCAA TAAGCTCCGT CTGAGTTCTT CTCTCAGCCG AATTCTCCAC CGGAGAATAC TTTATTCATC CGCCGCTAGA TCTTTCACCA CATCGGAAGG TCACCGTCCC ACCATCGTTC ATAAACAAGG TCTCGATATC CTCCATGATC CTTGGTTCAA CAAGGGTACT GCGTTTACGA TGACGGAGAG AAATCGTTTA GATCTTAGAG GTCTTCTTCC TCCTAATGTT ATGGATTCTG AGCAACAAAT TCAGCGTTTT ATGACTGACC TCAAGAGATT GGAGGAGCAA GCAAGAGATG GACCTTCTGA TCCTAATGCT TTGGCTAAGT GGCGAATTCT TAATCGCTTG CATGACCGAA ATGAGACTAT GTACTATAAG GTTTTGATTA ACAATATTGA GGAGTACGCG CCGATAGTCT ACACTCCTAC GGTTGGTCTT GTCTGCCAGA ACTATAGTGG GTTGTTTAGG AGGCCAAGAG GAATGTATTT TAGTGCTGAA GATCGTGGTG AAATGATGTC TATGGTTTAC AACTGGCCTG CTGAACAGGT TGATATGATT GTTGTTACGG ATGGAAGCCG GATCTTGGGT CTTGGAGATC TAGGCGTTCA TGGAATTGGA ATTGCTGTAG GGAAGCTTGA TTTATACGTT GCCGCAGCTG GAATAAATCC ACAACGGGTA CTTCCTGTCA TGATTGATGT TGGAACAAAC AATGAAAAAC TACTCAAGGA TCCCATGTAC TTGGGTCTGC AGCAACATCG TTTAGAGGAT GACAACTATA TAGATGTTAT TGATGAATTT ATGGAGGCAG TGTATACCCG GTGGCCACAT GTTATTGTGC AGTTTGAGGA TTTCCAGAGC AAGTGGGCTT TTAAATTATT GCAGAGGTAT AGATGCACCT ATCGAATGTT CAATGATGAT GTCCAGGGGA CAGCAGGGGT TGCAATCGCT GGTCTTCTTG GAGCAGTTAG AGCACAGGGC AGGCCGATGA TTGATTTTCC AAAGATGAAG ATCGTTGTTG CTGGCGCCGG AAGTGCGGGA ATTGGTGTTC TAAATGCTGC AAGGAAGACA ATGGCACGGA TGTTAGGAAA TACTGAAACT GCGTTTGATA GTGCTCAAAG TCAATTTTGG GTGGTTGATG CTCAGGGTCT TATCACCGAA GGACGAGAAA ATATTGACCC AGAGGCTCAG CCTTTTGCTA GGAAGACTAA AGAAATGGAG CGTCAGGGAT TAAAAGAAGG AGCAACTCTT GTGGAAGTGG TTCGAGAAGT TAAACCTGAT GTGCTTCTTG GTTTATCTGC AGTTGGAGGG TTATTCTCGA AAGAGGTTTT AGAAGCTATG AAAGGTTCAA CCTCGACAAG ACCGGCTATA TTTGCTATGT CAAACCCCAC AAAAAATGCT GAATGCACGC CTCAAGATGC ATTTTCTATA TTAGGCGAAA ATATGATTTT TGCGAGTGGA AGCCCATTCA AGAATGTGGA ATTTGGTAGT GGTCATGTAG GACATTGCAA CCAGGGAAAC AACATGTATC TATTCCCAGG TATTGGACTT GGCACTCTTC TATCTGGTGC TCCCATTGTC TCGGACGGGA TGCTTCAGGC CGCATCCGAG TGCCTGGCAG CATACATGAG CGAAGAAGAA GTGCTACAAG GGATTATATA CCCTCCAATA TCAAGGATAC GAGACATAAC AAAAAGAATA GCAGCTGCGG TGATTAAGGA AGCGATTGAG GAGGATTTGG TTGAAGGATA TAGGGAAATG GACGCTCGAG AGGTCCAAAA GCTGAATGAG GAGGAGCTGA TGGAGTACGT GGAAAACAAC ATGTGGAATC CAGAGTACCC GACTTTGGTT TACAAGGATG ACTAAGTTTG GTTCCCAAAA TGAACATGTC TACTCTCTCT TATTTATATG TAAAAATTTA TAGTTGGGGT TGCTTCATAC CCAATCAGAT TCATAGCTAC TGCTTTCTCT TATGTAAAAA GAAATATAAT TGGGTTGCTT GTTATCCAAT CAGATTCATA GTTTCCACTT TCTCTTATTT ATATGTATAA AA 
Length2112
Protein Sequence
Protein Residue
Map Locationscaffold_3: 17269407.. 17274484
Download Sequence
A.thaliana
AGI-codeAT2G13560.1
DescriptionNAD-dependent malic enzyme 1
TAIR curator summaryEncodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the alpha family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the beta-type NAD-ME2 (At4g00570). NAD-ME1 transcript and protein levels are higher during the night than during the day.
Alias[NAD-ME1][NAD-dependent malic enzyme 1]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg496813 2-oxoglutarate dehydrogenase, E1 component
2.82843 Ahg493188 Hyaluronan / mRNA binding family
3 Ahg485972 PBS1-like 1
3.4641 Ahg327070 cryptochrome 1
3.4641 Ahg490893 heavy metal atpase 1
4.58258 Ahg488785 mitogen-activated protein kinase 16
7.74597 Ahg920353 UBX domain-containing protein
9.59166 Ahg493373 SET domain protein 2
14 Ahg491857 Enoyl-CoA hydratase/isomerase family
15.9687 Ahg478309 cell division cycle 48
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression