Detail



ID : Ahg480475

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480475|fgenesh2_kg.3__3176__AT2G22870.1
Sequence
AAAAAAAATG GTGCTACTTC TCCGATATCG ATCCTTAACG ATAAATCCCA CTCCTTTAAT ACCAAAATCT CACAAATTCC ACACCCTCCA ATCATTTCGT AACCCTAATT TCATCTCCAC CCCAAAAGTC TCAGCCTCTT CGAACAATCC AACACCAACA ACGAATCGTT CGATCTCCGA CGCGGCCAAA TTCGCTAAGT CAGTGTTATT CATACCTCCT GGTGTAGAGA TTGAGGAACT AACAGATGAT ATGGTTCTTC CGGGCTCCAA TATCGTAATC GGACCTTTTG CAGGTCATTC TCAAATCAAA GAAGTTGAAT TTGTTAAAAG TAGTGCTCGA GCTAGAGATT GCACTAAAGA TGATCGTCCT GAGATTGCTA TTTTGGGTCG TTCTAATGTT GGCAAGTCTT CGCTTATCAA CTGTTTGGTT CGTAAGAAGG AAGTTGCTCT TACCTCTAAG AAACCTGGGA AGACTCAGCT TATAAATCAC TTCTTGGTGA ATAAGAGTTG GTACATTGTG GATTTGCCTG GTTATGGATT TGCTAAAGTT TCAGATGCTG CGAAAACAGA TTGGTCTGCG TTTACTAAAG GTTACTTCTT GAATAGAGAC ACTCTTGTAT GTGTTCTACT TCTGATCGAT GCAAGTGTTC CTCCTCAGAA GATTGATCTT GATTGTGCTA ATTGGCTTGG TCGCAACAAT GTACAGATGA CTTTTGTGTT TACGAAATGC GATAAAATGA AAGCAACGAA AGGGAAAAGA CCTGATGAGA ACATCAAAGC TTTCCAACAA ATCATTAGAG AGAACTTCAA AGTACATCCT CCTTGGATTT TGACGAGTAG TGTATCGGGT TTGGGCAGAG ACGAGCTTCT TCTTCACATG TCGCAGCTAA GAAACTACTG GGATCAATAG GT 
Length912
Protein Sequence
Protein Residue
Map Locationscaffold_3: 19617480.. 19621074
Download Sequence
A.thaliana
AGI-codeAT2G22870.1
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR curator summary
Alias[EMB2001][embryo defective 2001]
Gene coexpression
MR
MR Locus Description
25.8457 Ahg893370 peptide deformylase 1B
33.1964 Ahg927433 SUPPRESSOR OF AUXIN RESISTANCE 3
34.4674 Ahg318821
55.9643 Ahg930194 IQ-domain 5
58.6856 Ahg940804 Auxin-responsive GH3 family protein
62.6658 Ahg478051 NagB/RpiA/CoA transferase-like superfamily protein
70.2496 Ahg492454
77.3628 Ahg916789
77.9615 Ahg483095 Protein of unknown function (DUF399 and DUF3411)
85.1352 Ahg476621 plastid transcriptionally active 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression