Detail



ID : Ahg480573

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480573|fgenesh2_kg.3__3274__AT2G16940.1
Sequence
CTTCGTCTTC TTCACAGAGC TTTTTTCTTG CCCTAGATAG CGCGAGCGGG AGATTCCAGA TTGAGAGCAG CTTCGAGTTT CTCTCTCCTC GCCGTTCCTC TTCGCTTCTT CGAGTTTCGT TACCAGAGAG ATTCTAGGTA TTGAGGGAGA GAGTGGTGTA GAATGGACTT TGATGAATAT GAGTACTTAG AGAAGACAGT TGAAAATCCT CACTTGGAGA ATGAAGTTGG GAATGGTGGT GGTGATGAGA AAGTCAAATC TGATGGGAAA GAGCGGAGTA GAAGCTCAAG GCATAGGGGT GACGAGAAGA AGGAGAGGGA TGAAGACGAG GATGGTCGGC GTTCTAAGCG GTCGAGATCT CACCACCGTT CACGTTCTAG GGACAGAGAG AGGGATAGGC ATAGAAGTAG CCGGGAGCAC AGAGATAGAG ATCGTGAAAA GGATATAGAT AAAGAAGAAA GAAATGGGAA AGATAGAGAG AGGGACAGAG ATAAGGATCG AGACAGTAAA GGGCGTGACC ATGAAAAAGA TCGGTCAAGA AGGAGTAGAA GTCGATCAGA GCGACATCGG AGTCAGGAAA GAGAAAAGAG CCTGGAAATT GAACCTAAGG AAAGAGAGAC CAAGGACCGG GATAGAGATC GCAGACGCCA TAAAGATAAG AAGGATGATA AGGTAGAGCC TGAGGCTGAT CCTGAAAGAG ATCAGAGAAC AGTTTTTGCC TATCAGATTG CTTTGAGGGC AACAGAAAGG GATGTTTATG AGTTCTTTTC CAGAGCTGGA AAGGTGCGAG ATGTACGGAT AATAATGGAT CGAATTTCCA GGCGTTCCAG GGGAATAGGG TATGTGGAGT TTTATGATAC AATGTCTGTC CCTATGGCTA TTGCTCTATC TGGACAACCT CTTCTTGGTC AGCCTGTTAT GGTAAAACCT TCTGAAGCTG AGAAGAATCT TGTTCAGTCA ACAACTGCTG CTGCTGGAGC AGGGGGGATG TTGGGCCCCT ACTCCGGGGG AGCTAGACGT CTTTATGTTG GTAACCTCCA CATTAACATG TCAGAAGATG ATCTGCGAAA GGTTTTTGAA CCATTTGGGA GTGTGGAGCT GGTGCAAGTA CCTCGTGATG AAACTGGCCT CTGCAAAGGA TTTGGTTTTG TTCAGTTCGC CCGCCTGGAG GATGCTAGAA ACGCACTGAA TCTAAATGGG CAGTTGGAGA TTGCAGGTCG TGCAATCAAG GTGTCAGCTG TAACTGATCA AACTGAAGTC CCAGAAGCTG GACAGACGCA AACCACCGGT GATTTGGATG ATGATGATGG AGGTGGCCTG TCTCTGAATG CACAATCGCG GGCGCTTCTC ATGCGAAAGC TCGATCGCAG TGGAACTGCA TCAAGCACTG GCCTTACTAC AGCTGCATCT ATTCACGGTG GAGTTTCTAC AATCTCTTCA TTGGCAGCTC CTGCACTTGT ACAAGGGTCT TTTCCTGCTG TTGCTGGACT CGCAGGGGCC AGCATTATTC CCGGTGTAAT AGACCCAGTT GGTGCCCCCA GCGAATGTCT GCTGCTTAAA AACATGTTTG ATCCATCCAC AGAGACTGAA GATGATTTTG ACAAGGATAT AGAAGAAGAT GTTAAAGACG AATGCTCCAA ATTCGGAAAT CTGAATCATA TCTATGTTGA CAAGAACAGC GTTGGTTTTG TCTACCTGAG ATTTGAGAAT GTGCAAGCAG CCATAGGTGC ACAACGTGCT CTCCATGGAA GATGGTTTGC TGGAAAGATG ATTACTGCGA CTTACATGAC TACAGAGGCG TACGAGGCCA AATTCCCCGA GAGTAAGGTC GGCTAAAGGT ACTGAGAAAA AGTTGTTATT ATGGTTGTCA AAGCATAAAT GAAGATAAAA TCTGCGGTGA CAAATCCAAT CTTGTGTCAA ATTTATGTTT ATGCTTTTAC CCGCTTCTTG TATTCTTAAG TCTCGGTAAT GTGTGTGCCG GTAACTTTGA CACCTTTTCA AGTTTTAATT CAGTATTTGT ATTATGCTAA CATGTTTTAG ATTTCATAAG AATGTTTT 
Length2058
Protein Sequence
Protein Residue
Map Locationscaffold_3: 20428188.. 20433207
Download Sequence
A.thaliana
AGI-codeAT2G16940.2
DescriptionSplicing factor, CC1-like
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg478733 evolutionarily conserved C-terminal region 2
9.48683 Ahg484963
10.0995 Ahg480306 chromatin remodeling 5
14 Ahg494201 binding
14.4222 Ahg350108
20.1246 Ahg494576 Homeodomain-like transcriptional regulator
23.8747 Ahg344464 Structural maintenance of chromosomes (SMC) family protein
24.1454 Ahg494379
25.3772 Ahg478940
27.7128 Ahg490606
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression