Detail


ID : Ahg481027

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481027|fgenesh2_kg.4__87__AT2G21600.1
Sequence
AAAAAACGGA GTCTTGTGAA ATTGAGCGTC GTCGTCGTCC TTAGCCTTAG CCAGATCTGC ATCTTTTTCG CTGGCGTCGT CGAGATTCTT TACCATCCGT TGCAAGAATC ACAATGGATG GAAGTGGTGG TGACAGTGGT TCGATGGCTA CACCTGTACA AAAGAAGGTA CATGAGGCAT GGAGGGTTTA CCAATATTAT CTGGACAAGA CTACACCTCA TTCAACTAAC AGGTGGATCG GAACACTCGT CGTCTTTCTT ATCTACTGTT TGAGGGTTTA CTCTATTCAG GGATTCTACA TCATCTCCTA TGGTCTTGGA ATCTACCTCC TGAATCTGCT TATCGGGTTC TTGTCCCCTC TTGTTGATCC TGAGCTCGAA GTCACTGATG GAGCTACTCT CCCTACTCGA GGTTCTGATG AGTTCAAGCC ATTTATCCGT CGACTGCCAG AGTTTAAATT CTGGTACTCC ATGACTAAGG CATTCTGCAT AGCATTTCTC ATGACGTTCT TCTCGGTCTT TGACGTTCCC GTCTTCTGGC CTATATTACT TTGCTACTGG GTTGTTCTCT TTGTCCTCAC CATGAGACGC CAAATCGCCC ACATGATCAA GCACAAGTAC ATTCCTTTCA GCATCGGAAA ACAGAAATAT AGCGGCCGGA GATCTTCTGC GAGCAGCAGC GGCGGCTCTC GTGCTGATTG ATTTCGATTG TCAGCCACGT TCTCTGCAGA ACACTTTGGA ATGTTTTGTA GTGATG
Length756
Protein Sequence
Protein Residue
Map Locationscaffold_4: 372427.. 374616
Download Sequence
A.thaliana
AGI-codeAT2G21600.1
Descriptionendoplasmatic reticulum retrieval protein 1B
TAIR curator summaryKey player of retrieval of ER membrane proteins
Alias[ATRER1B][RER1B][endoplasmatic reticulum retrieval protein 1B]
Gene coexpression
MR
MR Locus Description
5.19615 Ahg480219 binding
16.7332 Ahg474113 S-methyl-5-thioribose kinase
33.9853 Ahg925037 splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein
37.4166 Ahg481576 CBL-interacting protein kinase 3
41.1825 Ahg484347 Protein kinase superfamily protein
46.9574 Ahg481582 calmodulin 5
48.1144 Ahg947205 Nucleic acid-binding, OB-fold-like protein
52.0481 Ahg476282 other RNA
52.6498 Ahg927353 metacaspase 4
54.4426 Ahg946766 UDP-Glycosyltransferase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression