| Annotation |
|---|
| Description | jgi|Araly1|481065|fgenesh2_kg.4__125__AT2G22010.1 |
| Sequence |
TCTCTCTCTC TCTCTCTCTT CGAGGAGGAA GAAAAAAAAG CGAAAAGTCT TCTCCTTTTT TTATTTATTT GAAAAACCCT AACACGAGTC CGCCGTCTTT GGTCTGAAGA ATCTGGGTAT TGATTGATTT TGGCTTCTGG GTTAATCGTT TTGATGTCAA TTTCTCCGCT TTTCTGAATC ATTTTCGAAT CGTGTCTGAT GAGTTCTTGA TGAAGATTCA GACTTTGGTT CTCTTGTAAT TGATCATTTA CGTGTTTGAT TCACAATCAA TGCCATATGG CTGAAGACAG CCTACGGGTT GGTATGATTT CATCTGGTTT GGCTGTTTTA CTGAATGGTG AAGATGCTAA AGAGAATTCG TCGAAAGCTC GTATTGTTCC ACATTTTGAT TATTCTGGTC ACCGGCCTTT AGAACGGACT ATCGAATTTA TATTTGGTCT AGCAGAAAAG TCGGTTGGTC CATTGGATGG TCAAGTAGAC AGTAGCTTGA TTAGAGCCGT GATTAAGAAT CAGTTTTCGA AGCTTCATGG TGAATTGGAT GTTTCAGTTA GTCAGAGAGA AGGAATCAGT GTAGTTCATC ATGGTGTTGG ACCTCCTGTT GTTGGCCTTG AAGAGTATAG CTTATGTGGT GATATCAGGA TTGTGAAGCC ACCTCTTGTG TTGGAGAGCT TAGCACTATT CAGTAGCGCC AGGGCTAATG CTTGTATTTG GAAAGGAAAA TGGATGTATG AAGTCGCTTT AGAGACCTCG GGAATTCAAC AACTTGGATG GGCAACACTT GCTTGTCCTT TCACTGACCA GAAAGGTGTG GGTGATGCTG ATGATTCATA TGCTTTTGAT GGTCGAAGGG TAAGCAAATG GAACAAGGAG GCTGAACCTT ATGGTCAATC ATGGGTAGCT GGGGATGTCA TCGGTTGCTG CATAGATTTG AACTGTGATG AGATATACTT CTACAGGAAT GGTGTCTCCC TCGGTGCTGC ATTTACTGGT ATTAGAAAAC TTGGACCTGG ATTTGGGTAT TACCCTGCTA TATCTCTCTC CCAAGGTGAG AGATGCGAGT TAAATTTCGG CGCTTACCCG TTTAAGTACC CTGTTGAAGG CTTCCAACCT CTTCAAGAAG CTCCACCTCG ATTTTCTTTT GCAACAGAGC TACTACGATG CTTCTCAAGA CTGCTGGATA GGCCAGACCG CTCGTTGGCT GATACATTAA GTCGACTGAG GAGATTTGCC TCGGTTGAAG AACTCTTTTC CCCTGTTTCC TCTGCCATAT GTGATGAGTT CTTTTACATA CTTGAACAAG ACCCTTTGTT GCCTGAGTAC TTGGGACGGG GTGCATTTCT GTCATTCCTC TTGGAGATTT TCAGATCCCA AGCACCGCAT GATTCGTCAA GTTTAGACAA AGTTCTTGAT GTGCTTCTTG AGTTCCCACA ATCTCATTTG ATCTTTGAGC ATGTAGTAAA CGCTCTGGCT TGTGGCTGCA AAACAGCGAC ACTGATTCTA ACCGAATGTC CATACTCCGG ACCTTATCCC TATCTTGCGC TGGCTTGTCA TTTGTTAAAA CGGGAAGAAT TGATGGTACA ATGGTGGAGA TCTTTGCATT TCGAGTTTTT GTTTGAAGCT TTCTTGTCAT GTAGGAGTTC CAACAAGCAT GACTTACAGC AGTTAATGCC TGTTGTTTGG TGGCCTGGAT CCTCTGAAGA TATATCCCAC GAGAGTAGCA TGGGATTTAC GATCTCCGCT CTCTCTGAAG CCATTAACAA GATTGAGGAG AAGCAGAGGA ACCTCTGTCT CTTGGTCATA CAATTCATAC CACCTGTAAC ACCTCCCCAG CTTCCTGGTT CAGCGTTCCG CGGATTCCTA CAGAACCTTT TATTGAAGAA CAGAGGCGCA GATAGGACTC TGGCCCCTTC TGGAGTTACA CGCAATTCAG TTCTTGTCTC TCTGTTCTCA GTTATACTCC ATTTTTTGTC AGAAGGTTTC GCAATGCTGA AGAGTAGTGA AGCCGTCCAT CACAATGTTG GTTTTCTTCA CAGAGGTGGA CAGCAGAAGT TTCCATTGAG TTTGTTTCTT AAAAATGATC CACATCGAGC TGATATCACT AGGCTTGGCG GGCTATTTAG TCATATATCG AAGTCCTACC CCACAGATGA TCAAGAAGAA GAAATAATGC GGTGGGAAGA AGGTTGTATG GATGATGAAC AGAATAGAGT AACTCACGCG ACTGATCAGA AGCCATGCTG TTGCTTAGCT TATGATACCG ATCTTACTAA ATCCTTGAAG GATCGAGGAA AAAATACTGC TCAAAGTTCT CGTGGTCGAT GCAGTTCCAT TCCTGAGAGA TCCTCTCAAG TTGCTGCAGA ATGTAGTGCT GGAAGTTTCA GTGAAGAAAT AGAGGACAAA CCTAGCACAA GTAATCAGTC TGACCCTGAC TTTGGTTATC GTCCAGTAAG ATTTATGCGG ACTGCACTTC AAGAGAGTAG AATCTCATCT GCTATACTAA GCGAAGAAGA ACTATTGGAT GCTCTATTGC TATTATACCA TATTGCTGTT GCTCCAAATT TTAAGCAGGC ATCATATTAC ATGTCTCACC AAACGCAATC AATATCACTT CTTGAAGAAA CTGATAAACA GATAAGAGAG CGGGCTTCTA GTGACCAATT AAAGCGCTTG AAGGAAGCTC GCAACAACTA CAAGGAAGAC GTGATGGAGT GTGTTAGACA TTCCGCATGG TTCCGCATCT CATTGCTCTC TCGATGGAAG CAAAGAGGAA TGTACGCATT GTGCATGTGG GTTGTACAGC TACTTCTGGT TCTCAGCAAA ATGGATTCTG TGTTTGTTTA TATTCCAGAG TTCTACGTTG AATCTTTGGT AGACTGTTTC CATGTGCTCC GCAAGAGCGA TCCTCCGTTT GTCCCCTCAA CAACATTTAT CAAACAAGGA CTTTCATCAT TTATCACTTT CGTAGTTACA CACTTCAATG ATTCAAGGAT ATCGAATACA GATCTTAAAG ATTTACTTCT CCAGTCAATA TCCGTCCTGG TACAGTACAA AGAGTACTTG GAAGCTTTCG AGAACAATGA GGCAGCTACT AAACACATGC CTGCAGCACT ACTGGCAGCG TTTGACAACA GATCTTGGAT CCCTGTCACA AATATATTTC TTCGTCTTTG CAAAGGTTCT GGCTTTAGTT CTTTAAAGAA CGGGGAGTCT TCGGTTTCAT CTACTGTTTT CCAGGTGCTT CTACGAGATG CTTGTATCAA TGATGGTGAA TTACTGTCTA CTTTTCTTAA CCGGCTATTC AACACACTGA GCTGGACCAT TACTGAATTT TCTGTCTCGG TGCGAGAAAT GCAAGAAAAG TATCAGGTAA TGGAGTTTCA ACAAAGGAAA TGTTGTGTGA TATTTGAGCT TTCAAGCAAT CTCGCAAGAG TCTTAGAGTT CTGCACTTAC GCAATACCAC AAGCATTTCT TGCTGGGACT GACACGAATC TTCGTAGGCT CACTGAGTTG ATTCTTTTTA TCTTGAATCA CATGACCTCA GCAGTAGATG ACGAGTTCTT TGATCTGTCA CTTAGACGGC AAGGACAACC TTCAGAGAAA GTTAGCCGAG GGGTCTTATT AGCTCCTTTG GTGGGTATAA TCTTGAATCT TTTGGAGGCT AGTGAAGACT CAAAACCGAA GCAACATGAT GTAATTGGTC TTTTTGCAAG CATGGACTGT CCCGATACAG TGTATTACGG GTTTCAATAT CTCTTGGAAT ATAATTGGGA CGGTTGTGTA AGCGGGGATG ATGCGTATGT AAAGAAACTT GGACAACTTG AGAACTTCTT GAACAATCTC ATAAACCGGG CGTCATCGCA AGAACCCGAA GGAAAAGAAG AGCTGTTCAA CAAAGACATG ACGGATATAG AAGACAACAC TTGCTGTATC TGCTACGCGG GGGAGGCTAA TGCAATGATT GCTCCATGTT CACATCGATC ATGTTATGGC TGCATAACTA GACATCTTCT CAATTGTCAG AGATGTTTTT TCTGCAATGC TACGGTGATA GACGTTATAA GAGACAAAGA AGTAGAAGAC GATGATGATC ACAAAAGAAG CACCTGAAGC TCGGGTTAGT TGCGGTTACA CAGAAGGAAA GATCTTTAGG ATGGGGAGCA AAGGAAGAAG GATTATAGAT TTTTATAGGA TAAATAAGAA ACAAAAAGAA AAACAAAGGT CTGTGATAAT TTTGTAGGAC CTGGTCTTGT GTTTTTTCTT GTATATATGA GAATGAAATG GAAATGAATT AAAGGCTC |
| Length | 4298 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 595864.. 601495 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G22010.2 |
| Description | related to KPC1 |
| TAIR curator summary | Encodes a protein predicted to act as a RING E3 ubiquitin ligase. It appears to regulate the stability of the KRP1/ICK1 cyclin dependent kinase inhibitor. Induced by beet severe curly virus (BSCTV) C4 protein. |
| Alias | [RKP][related to KPC1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.24621 |
Ahg493153 | SCARECROW-like 13 |
| 9 |
Ahg471429 | Zinc finger, C3HC4 type (RING finger) family protein |
| 11.7473 |
Ahg492207 | Protein phosphatase 2C family protein |
| 13.3041 |
Ahg311699 | ENTH/VHS/GAT family protein |
| 19.4936 |
Ahg478478 | protein phosphatase 2CA |
| 23.0651 |
Ahg943707 | alpha/beta-Hydrolases superfamily protein |
| 24.6577 |
Ahg488204 | pheophytinase |
| 30.8221 |
Ahg951497 | SKP1/ASK1-interacting protein 2 |
| 31.1127 |
Ahg496351 | |
| 31.8434 |
Ahg495379 | spermidine synthase 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|