| Annotation |
|---|
| Description | jgi|Araly1|481593|fgenesh2_kg.4__653__AT2G27100.1 |
| Sequence |
CCGATTTAGG GTTCCGATCC AAATGGCCGA TATTACTCTT CCTCCGTCTG ATTCCGCCGT CGATAACCGT CTCCCTGAGA AATCTACCTC TTCCTCACCA CCACCTCCAC CGGCTTCTTC CTCTCTACCG CAACAAGAAC AGGAACAAGA CCAGCAACAG CCTCCGCAAC GCCGTGAGAG AGATTCACGA GACCGAGACA TCGAACGTCC TCCTCCTAAT CGCCGTGACC GTGACCGTTC GCCTCTCCCA CCGCCTCGTA GGGATTATAA GAGACGGCCT AGCTTGAGTC CTCCGCCACC GTACAGAGAT AGGCGGCACT CTCCTCCTCA GCGTCGTTCG CCTCCTCATA AGCGTTATCG GAGGGATGAT AATGGCTATG ATGCTCGCCG TGGCAGTCCT CGTGGTGGCT ATGGGCCTCC CGATAGAAGA TTTGGATATG ACCATGGTGG AGGATATGAC CGTGAAATGG GTGGGAGGCC TAATTATGGT GATGAAAGGC CTCATGGCCG CTTTATGGGT CGCTATCAAG ACTGGGAGGG AGGACGTGGA GGTTATGGTG ATGCTTCCAA CAGTGGAAAT ACTCAAAGGG ATGGATTGAT GTCATACAAA CAATTTATCC AGGAGTTGGA AGATGATATA TTGCCATCAG AAGCTGAACG CAGGTATCAA GAATATAAGT CAGAGTATAT CACAACACAG AAACGTGCCT TTTTTAACAC CCACAAAGAG GAAGACTGGT TAAAAAATAA ATATCATCCA ACAAACTTAC TCTCTGTCAT AGAAAGGAGG AATGAGCTTG CACAGAAGGT GGCAAAGGAT TTCTTACTTG ATTTACAAAG CGGGACACTA GATTTAGGTC CTGCAGTGAC AGCATTGAAT AAATCCGGCC GGACCAGTGA ACCAAATTCT GAGGATGAAG CCGCTGGTGG TGGTAAAAGA AAAAGACATG GTATGGGGGG AGCTAAAGAG ACTGAACTTC TTTCAGCCGC ACCGAAAGCA CCCAGTTTCA CCTCTGATCC AAAGAGAATT CTGACTGACG TTGAACAAAC ACAAGCCCTT GTGCGTAAGC TAGACTCTGA GAAGAAAATT GAGGAAAATG TTTTACAAGG TTCAGAAACT GAAAAATCGG GTAGAGAAAA GTTACACAGT GGTTCGACTG GTCCAGTTGT AATCATAAGG GGGTTGACAT CTGTGAAAGG CCTTGAGGGT GTTGAATTAC TCGACACGCT TGTTACATAT CTATGGCGTG TTCATGGTGT GGACTATTAC GGAAAGGTTG AAACAAATGA AGCTAAGGGT CTGCGGCATG TGAGAGCTGA AGGAAAAGGT TCTGATGCAA AAGGAGATGA GAGTGAAAGT AAATTTGACT CTCATTGGCA AGAGAGGTTG AAAGGTCAAG ATCCCTTGGA AGTGATGGCT GCCAAAGAGA AGATAGATGC TGCCGCTACG GAAGCTTTAG ATCCACATGT CCGAAAGATT AGAGATGAGA AGTATGGTTG GAAATATGGT TGTGGAGCCA AGGGGTGCAC GAAGCTGTTT CATGCTGCTG AATTTGTGTA CAAGCATCTC AAGCTGAAAC ACACTGAGCT TGTCACAGAG CTGACTACCA AAGTTCGGGA AGAACTGTAT TTTCAGAACT ATATGAATGA TCCTAATGCT CCAGGAGGAC AACCAGCCAC GCAGCAATCT GGCCCGAGAG ATAGACCTAT AAGACGTAAA CCCAGCATGG AGAACAGACT GAGGGATGAT CGAGGTGGAC GCAGGGAGCG TGATGGACGT GCTAATGGAA ATGACAGAAT TGAACGGTCA GAAGATCAAC AGAGAGGGGA TAATGATGGT GGAAATCCTG GGGAACTTGG GTACGATGCA TTTGGTGGAC AAGGTGGCGT TCATGTTCCT CCCTTCTTAT CGGATATAAA CCCACCACCA ATGCTGATGC CTGTTCCCGG TGCCGGGCCA CTGGGACCAT TTGTACCAGC ACCACCTGAG GTTGCTATGC AGATGTTCAG GGACCCAAGT GGACCCAACA ACCCTCCTTT TGAAGGTAGC GGGAGAGGTG GACCTGCCCC TTTTCTTTTG TCTCCGGCCT TTAGACAGGA CCCTAGACGG CTACGCAGTT ACCAAGACCT AGATGCTCCA GAGGAAGAGG TGACCGTTAT TGATTACAGG AGCTTGTAGA CAAGAAAGGG CTAGAGAGAT GCCGAGTTTA CCCGTTTGGG TTGATTGTGG CAATTATTTC TTGTTCCTCC CAATTTTCAC TCACTAAAGC GTAAAATACG CACTCCTTAT CGATTTTCAT GTGCTTACTA ATTCTGTTCG ACAATTACAT AAATGGCATG CAAATTTCTT GTATTGAATA ATCCGTTTTA TCAACATTGT TTGTTATC |
| Length | 2388 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 10569619.. 10573745 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G27100.1 |
| Description | C2H2 zinc-finger protein SERRATE (SE) |
| TAIR curator summary | Identified as a leaf form mutant by Redei having serrated leaves. Further analysis of the single loss of function allele indicated pleiotropic effects extending to many aspects of shoot development such as taller meristems, alterations in phase transition, phyllotaxy and branching. Encodes a single zinc finger containing protein that is expressed in meristems and organ primordia. |
| Alias | [SE][SERRATE] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.60555 |
Ahg898458 | Cleavage and polyadenylation specificity factor (CPSF) A subunit protein |
| 4.24264 |
Ahg494121 | Protein kinase superfamily protein |
| 7.48331 |
Ahg489106 | ZPR1 zinc-finger domain protein |
| 11.4018 |
Ahg474074 | Phosphatidylinositol 3- and 4-kinase family protein |
| 11.4891 |
Ahg951196 | Glycosyl hydrolases family 31 protein |
| 11.6619 |
Ahg490107 | Met-10+ like family protein / kelch repeat-containing protein |
| 12.4097 |
Ahg489225 | phosphate deficiency response 2 |
| 15.9374 |
Ahg474047 | stomatal cytokinesis defective / SCD1 protein (SCD1) |
| 20.445 |
Ahg494702 | regulatory particle triple-A ATPase 4A |
| 22.4499 |
Ahg350146 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|