Detail



ID : Ahg481961

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481961|fgenesh2_kg.4__1021__AT2G30490.1
Sequence
TCAGCAGCTT CTTCTGCTTT CAATCACTCG CCGACGATTT TCTCACCGGA AAAATTAATC ATTGCGGATA CACAAACTAT AATGGACCTT CTCTTGTTGG AGAAGTCTTT AATCGCCGTC TTCGTGGCGG TGGTTCTCGC CACGGTGATT TCAAAGCTCC GCGGCAAGAA ATTGAAGCTA CCTCCAGGTC CTATGCCGAT TCCGATCTTC GGAAACTGGC TTCAAGTCGG AGATGATCTT AACCACCGTA ATCTCATCGA TTACGCTAAA AAATTTGGCG ATCTCTTCCT CCTCAGGATG GGTCAGCGAA ACCTAGTCGT CGTCTCTTCA CCGGATCTGA CTAAAGAAGT ACTCCACACA CAAGGTGTTG AGTTTGGATC TAGAACGAGA AACATCGTGT TCGACATTTT CACCGGGAAA GGTCAAGATA TGGTGTTCAC TGTTTACGGA GAGCATTGGA GGAAGATGAG AAGGATCATG ACGGTTCCGT TCTTCACCAA CAAAGTTGTT CAACAGAATC GTGAAGGTTG GGAATTCGAA GCAGCGAGTG TTGTTGAAGA TGTGAAGAAG AATCCAGATT CTGCTACTAA AGGAATTGTG TTGAGGAAAC GTTTGCAATT GATGATGTAT AACAATATGT TCCGTATCAT GTTCGATAGA AGATTTGAGA GTGAAGATGA TCCTCTTTTT CTTAGGCTTA AGGCTTTGAA TGGTGAGAGA AGTCGATTAG CTCAGAGCTT TGAGTACAAC TATGGAGATT TCATCCCTAT CCTTAGACCA TTCCTTAGAG GTTATTTGAA GATTTGCCAA GATGTGAAGG ATCGAAGAAT TGCTCTATTC AAGAAGTACT TTGTTGATGA GAGGAAGCAA ATTGCGAGTT CTAAGCCTAC AGGTAGTGAA GGATTGAAAT GTGCCATTGA TCATATCCTT GAAGCTGAAC AGAAGGGAGA AATCAATGAG GACAACGTTC TTTACATCGT CGAGAACATC AACGTTGCTG CGATTGAGAC AACATTGTGG TCAATCGAAT GGGGAATTGC GGAGCTGGTG AACCATCCTG AAATCCAGAG TAAGCTAAGG AATGAAATCG ACACGGTTCT TGGACCGGGT GTGCAAGTGA CTGAGCCTGA GCTTCACAAG CTTCCATACC TTCAAGCAGT GATCAAGGAG ACACTTCGTC TAAGAATGGC GATTCCTCTC CTCGTGCCTC ACATGAACCT CCACGACGCC AAGCTCGCTG GCTACGATAT CCCAGCAGAA AGCAAAATCC TTGTCAATGC TTGGTGGCTA GCAAACAACC CCAACAGCTG GAAGAAACCT GAAGAGTTTA GACCAGAGAG GTTCTTGGAA GAAGAAGCGC ACGTGGAAGC GAATGGTAAT GACTTCAGGT TTGTGCCGTT TGGTGTTGGA CGTAGAAGCT GTCCCGGGAT TATATTGGCA TTGCCCATTT TGGGAATCAC CATTGGAAGG ATGGTCCAAA ACTTCGAGCT GCTTCCTCCT CCAGGACAGT CTAAAGTGGA TACTAGTGAG AAAGGTGGAC AATTCAGCTT GCACATCCTT AACCACTCCA CAATCGTTAT GAAACCAAGG AACTTTTAAA TTTTCTGCAA AAAATGACTT TATATAATGA TGTTTGTGAA ATCTGTTGAA TATTCCCATG TTTTGCTTTT GTGAGATGTT TTGTGTAAAA TGTCTTTAAA TGGCTCGTTC TATCGATTGC AATAATTAGT GGTGCCCATT GTTTTGAATG GACATTGATG TTCTATCATT TCAAAATCTC 
Length1780
Protein Sequence
Protein Residue
Map Locationscaffold_4: 13530235.. 13532330
Download Sequence
A.thaliana
AGI-codeAT2G30490.1
Descriptioncinnamate-4-hydroxylase
TAIR curator summaryEncodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development.
Alias[ATC4H][C4H][CYP73A5][REF3][CINNAMATE 4-HYDROXYLASE][cinnamate-4-hydroxylase][REDUCED EPRDERMAL FLUORESCENCE 3]
Gene coexpression
MR
MR Locus Description
3.31662 Ahg482690 PHE ammonia lyase 1
4.89898 Ahg487319 Chalcone-flavanone isomerase family protein
5.47723 Ahg887428 PHE ammonia lyase 1
5.83095 Ahg495497 O-methyltransferase 1
6.48074 Ahg491705 NAD(P)-binding Rossmann-fold superfamily protein
8.24621 Ahg488219 Chalcone and stilbene synthase family protein
8.30662 Ahg944510 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
9.79796 Ahg943716 plasma membrane intrinsic protein 1;4
9.94987 Ahg477021 rhamnose biosynthesis 1
10.0995 Ahg485933 Chalcone-flavanone isomerase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression