Detail



ID : Ahg483018

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483018|fgenesh2_kg.4__2078__AT2G39840.1
Sequence
AAAAAAATAC TCGAAAGTCT TTGCGCGTAA TTTTTTTTTG GGGTCGAAAA AAATTAGGGT TTTTTTTTGT TTGGTTCTGT TAATGGCGAC GACGACGCAA GGGCAGCAAA CGGCGATTGA CACGGCGGTT CTCGATGATA TAATCAGGCG ACTCACGGAG GTCCGGTTAG CTAGACCAGG AAAGCAAGTC CAGCTCTCGG AAGCTGAGAT CAAACAGCTC TGTACTACAG CTAGAGATAT TTTTCTTCAG CAACCCAATT TGCTTGAGCT TGAGGCTCCC ATCAAAATCT GTGGTGACAT ACATGGGCAA TATAGTGATC TGCTGAGGCT ATTCGAGTAT GGTGGCTTCC CTCCTAGTGC CAATTATCTA TTTCTGGGGG ATTATGTGGA CCGAGGCAAA CAGAGTCTTG AAACAATATG TCTCTTACTA GCTTACAAGA TCAAATACCC TGGCAACTTT TTTCTACTAA GGGGAAACCA CGAATGTGCT TCTATCAATC GGATTTATGG GTTTTATGAT GAATGTAAAA GGAGGTTCAA TGTGAGGGTA TGGAAGGTTT TCACTGACTG TTTTAATTGC CTTCCTGTTG CGGCGCTTAT AGATGACAAA ATATTGTGTA TGCACGGTGG ACTTTCGCCG GATCTTGACC ATTTGGATGA GATTAGAAAC TTGCCTCGTC CTACTATGAT TCCTGACACC GGGCTTCTCT GTGATTTGCT CTGGTCTGAT CCTGGGAAAG ATGTTAAAGG ATGGGGAATG AATGATAGAG GTGTTTCATA CACCTTTGGT CCTGATAAAG TTTCCGAGTT TCTCACAAAA CATGATTTAG ACCTTGTGTG TCGTGCCCAT CAGGTTGTGG AGGATGGTTA TGAGTTCTTT GCTGATAGAC AACTTGTGAC GGTGTTTTCA GCTCCTAACT ACTGTGGTGA ATTTGATAAT GCTGGTGCGA TGATGAGCGT GGACGAGAAC CTTATGTGCT CGTTTCAGAT TTTGAAGCCC GCAGAGAAGA AGACCAAATT CATGATGTCC ACAAAGATTT GATCCTTTCA TTGAGGTTAG TCAGTAGTCT GTCCTTGGTT GAAACCAAAC CATTGAACAT TTGGCTTTGA AGTGTGTACT GATTGGAAAG GAGCAAGACC TTAGTCTTCT AATCTCTTTC TTCCCCAAAT TCACTTTCTG CGTATTTTTT TCTATCTTCA TTTTATGGGT TTTACATGAT TTTCATCTGC CTGTTGAGAT CACATAGTTG GTGTGTACAT GCATATGGTC GTTTCTTGGA TTTTAGGACA CCAAATGAA 
Length1299
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18366971.. 18368829
Download Sequence
A.thaliana
AGI-codeAT2G39840.1
Descriptiontype one serine/threonine protein phosphatase 4
TAIR curator summaryEncodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.
Alias[TOPP4][type one serine/threonine protein phosphatase 4]
Gene coexpression
MR
MR Locus Description
7.14143 Ahg888739 P-type ATP-ase 1
15.2971 Ahg328473 RING/U-box superfamily protein
18.868 Ahg937188 conserved peptide upstream open reading frame 61
24.8998 Ahg490346 RELA/SPOT homolog 1
25.4951 Ahg492357 Protein kinase superfamily protein
30.3974 Ahg481423 holocarboxylase synthase 1
34.2491 Ahg934858 Nucleotidyltransferase family protein
37.108 Ahg940356 DDT domain-containing protein
37.5233 Ahg493629 fimbrin-like protein 2
39.0128 Ahg491819 protein kinase family protein / WD-40 repeat family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression