Detail



ID : Ahg483050

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483050|fgenesh2_kg.4__2110__AT2G40100.1
Sequence
ACTATTATTC TAAAATCCAA AAAATCAAAA ACCTATATGT TATAAACATT GGAATCATCA GTCTCTAAGC AGTATCACAC CAACTCAATA TGGCTACCAC CACTGCAGCA GCAGCCTCAG GTATCTTTGG GATCCGGATT CAAGATCCTA GACTTGGAAC CGGTAGGATC CAAGCCCGGT TCGGGTTCAG TTTCGGGAAA AAGAAACCGG CTCCACCACC AAAGAAATCA AGGCAGGTCC AAGACGATGG AGACAGACTA GTTTGGTTCC CCGGCGCAAA CCCGCCGGAA TGGTTGGACG GATCGATGAT CGGTGACCGT GGATTTGATC CGTTCGGTTT AGGTAAACCG GCGGAGTATC TTCAGTACGA TTTCGACGGT CTTGACCAAA ACCTTGCCAA GAACGTGGCG GGTGACATCA TCGGGATCAT CCAAGACTCG TCTGAGATCA AACCCACGCC GTTTCAGCCG TACACTGAAG TCTTTGGGAT CCAACGGTTC AGAGAATGTG AGCTGATTCA TGGAAGGTGG GCCATGCTTG GCACTCTAGG TGCCATCGCC GTTGAGGCTC TCACCGGAAT TGCATGGCAA GACGCCGGAA AGGTGGAATT GGTGGAAGGA TCGTCGTATT TGGGACAGCC ATTGCCATTC TCTTTGACGA CGTTGATATG GATAGAAGTG CTAGTGGTCG GATACATTGA GTTCCAACGT AACTCTGAGC TTGATCCAGA GAAACGGATT TACCCGGGTG GGTATTTTGA CCCGTTGGGA CTCGCGGCTG ATCCAGAGAA GTTGGACACC TTGAAGTTGG CGGAGATAAA GCACTCTCGT CTCGCTATGG TTGCATTTCT TATCTTTGCT CTTCAGGCGG CCTTTACCGG CAAAGGCCCT ATCAGCTTCC TCGCCACCTT TAACAATTAG TTAATGAACC TTTCTATCTT TACTTTTTTC AAAAAAAAAA ATATACGTTA AAAACTCTAT GATGCATGTT ATATCATAAA TAAGTCGTTT ATTGTTT 
Length1017
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18525388.. 18526941
Download Sequence
A.thaliana
AGI-codeAT2G40100.1
Descriptionlight harvesting complex photosystem II
TAIR curator summaryLhcb4:3 protein (Lhcb4.3, light harvesting complex of photosystem II
Alias[LHCB4.3][light harvesting complex photosystem II]
Gene coexpression
MR
MR Locus Description
10.9545 Ahg948643 RAB GTPase homolog E1B
14.2127 Ahg480305 alanine:glyoxylate aminotransferase
21.3542 Ahg926346 MADS-box family protein
22.2711 Ahg492157 Aldolase superfamily protein
26.8328 Ahg492810 NAD(P)-binding Rossmann-fold superfamily protein
27.2947 Ahg910228
28.4956 Ahg359775 TraB family protein
34.3366 Ahg473938 mitochondrial lipoamide dehydrogenase 1
34.9285 Ahg490753 FK506-binding protein 16-2
36.7287 Ahg947767 Disease resistance protein (TIR-NBS-LRR class) family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression