Detail



ID : Ahg483149

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483149|fgenesh2_kg.4__2209__AT2G40880.1
Sequence
ACCGACATGG CCAAAACCTA CGAATCTGAA ATTGTAAGAA GCATAATAAG TCTCTCTATT AAAGATGGAA TCAAAAAAGT TCTGGATCGT TACTCTTCTT CTCTGTGGAA CAATTCAATT AGCGATTTGC AGATCAGAAG AGAAAAGCAC AGAGAAGACG ATGAAGCTAG GAGGCGTTCA TGATCTCCGA GGAAATCAGA ACAGTGGAGA GATCGAGAGT CTCGCTCGAT TTGCCATTCA AGAGCATAAC AAACAACAGA ACAAGGTTCT TGAGTTCAAG AAGATTGTAA AAGCAAGAGA GCAGGTAGTT GCAGGAACGA TGTACCACTT AACCCTAGAA GCAAAAGAAG GTGATCATAC GAAGAACTTT GAAGCCAAAG TGTGGGTGAA GCCGTGGATG AACTTCAAAC AGTTGCAGGA GTTTAAGGAA TCCTCTTCTT GAATTTCACT TGTTCAAATG TATGATTACA AATGCTCTGA GAATAATAAT AGTCTGAAAT AAATGTAATG TATTGCTATA GGCAAAACTT TAATTTAATG TAATCAGTCT GTCTTTGTAT GTTTGCTTTC TGTTTATTCT TATGTTTC 
Length588
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18917927.. 18918648
Download Sequence
A.thaliana
AGI-codeAT2G40880.1
Descriptioncystatin A
TAIR curator summaryEncodes a protein with cysteine proteinase inhibitor activity. Overexpression increases tolerance to abiotic stressors (i.e.salt,osmitic, cold stress).
Alias[ATCYSA][CYSA][FL3-27][cystatin A]
Gene coexpression
MR
MR Locus Description
7 Ahg486694 homeobox 12
14.6969 Ahg479444 ABRE binding factor 4
17.4929 Ahg934911 Basic-leucine zipper (bZIP) transcription factor family protein
18.4391 Ahg936169 ACT domain repeat 5
18.9737 Ahg476240 RNA polymerase II transcription elongation factor
20.2978 Ahg934499 SOUL heme-binding family protein
21.8174 Ahg938858 Mitogen activated protein kinase kinase kinase-related
33.4664 Ahg947850 cycling DOF factor 2
36.6606 Ahg488817 ARM repeat protein interacting with ABF2
43.2435 Ahg472194 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression