| Annotation |
|---|
| Description | jgi|Araly1|894371|Al_scaffold_0006_2367 |
| Sequence |
ATGGCGGCCC ATAAGGCCTA TTGGGCTTTT AGTAAATTAT ACCTCCACGT TGGGGATAGT ATTCCTCTTG TGACCAAACA TTTGGAAACC ACGAACAATC AGTTTCTGCC CAATCTTCCC GCGTTTTTCA CATACTTCAA TATCGCCGCC GGCGAAATCT TTGCTTCTTC TCTTAATGAT AGTCCTTATA GAGAATCTGA AGCCGTTTCG TCTCTTCCTT TGCCTGATGA TGACGGTGAC GACACCACGA TTCTTGAGAA AGAATCTGTG GAGTCTCAAG AATCTGTCGA GTTACTACTG TCTAGGAAGA ATTCCGAAAC GAATCTTGTG ATGAAGCAAG TGAGTATCGA GCAGGTGTTT TCTAGAAAGA AGAAAGCAGA TGCTAGTCTC AACCTTGAAG GGGAGCAGAA TGGGAACAAC GTTGATGGGG AAAAACTCTC TACCAAGCAT AAGGATGCTC AAGGAGGAGA TGATTCTGTA TGGCTGGTCT CATCTGATTC TGAACCATCC TCTAGTGCTC CGATAAAGCA GGAAGTGACT GTGTCAACTG AAAAGGATGA GGATTTTGTT CTTGATGCTA CAGAGGAAGA ACCTGCAGTT AAGAAAGTTC GAAAGGAAAA ATCTCCAAAA ACAAAGTCAA AGAGCGGTCG CAAGACACCC AAGGAAGGAA ATGGTGCACA GAAAATTTTT AAAAGTGAAG ATAAAGTTAT TAATACCACT ATAGCCGAGG AAGTAACAAC GGAAAAATCT CCAGAAACAA AGTCTAAAAG CAGTCGCAAG ACACCCAAAG AAGAAAATAG TGCACAGAAA ATTTTTAAAA GTGAAGATAA AGATACAGAT ACCACTATAG CCGAGGAAGG AACAACGGAT CAGAAGATCA AGCCTTCTTC TGGCTCAAGT TCAAGATTGC CTTTGGTACT TTCTGAGAAG GTGAATCGTA CAAAGGTACT TGTTGAATGT GAAGGTGACT CGATAGATTT GAGTGGAGAC ATGGGGGCTG TTGGACGAGT AATTGTTTCA GACACAACCG GAGACATGTA CTTGGACTTG AAAGGCATTA ACACGTTTTC ATTTCATGTT TCAGGAACCA TATATAAATC AACAATCATT CCATCCAGAA CATTTTGCGT AGTTAACGTA GGTCAGACAG AGGCAAAGAT TGAAGCTATT ATGAATGACT TCATACAGCT GACACCACAA TCTAATGTGT ACGAGGCAGA AACAATGGTA GAAGGCACTC TGGAGGGATT TTCATTCGAA TCAGATGATG AAACTAACAA AAACGCCAAG ACTGCTTCAA AGCCAGCTGA TCAAAGTGGA GGCACAGAGG AAGAAACCAA CACAAAAGCC AAACCCAAAG CCAAAGCAAA AGGCGAAACT GTTATAGGAA AAAAGAGAGG AAGACCATCT AAAGAGAAGC AGCCACCAGC AAAGAAGGCT AGAAATTCTG CCCCTAAGAA GCCAAAATCC AAGAAATGA |
| Length | 1479 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 10200959.. 10204355 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G24630.6 |
| Description | double-stranded DNA binding |
| TAIR curator summary | This gene is predicted to encode a protein that forms part of the topoisomerase VI complex. BIN4 is a nuclear-localized protein that can bind DNA. bin4 mutants are brassinolide-insensitive dwarves with severely reduced cell size in leaves, roots, and hypocotyls. Proper development of root hairs and trichomes is also disrupted in bin4 mutants and they have elevated levels of double strand breaks in their cotyledon cells. |
| Alias | [BIN4][MID][brassinosteroid-insensitive4][MIDGET] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.59166 |
Ahg483227 | WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related |
| 19.0526 |
Ahg890460 | Major facilitator superfamily protein |
| 19.105 |
Ahg471412 | |
| 26.5518 |
Ahg476324 | SNARE associated Golgi protein family |
| 46.5081 |
Ahg934838 | Integrase-type DNA-binding superfamily protein |
| 46.9468 |
Ahg918735 | Leucine carboxyl methyltransferase |
| 53.2353 |
Ahg496551 | GroES-like zinc-binding alcohol dehydrogenase family protein |
| 59.4475 |
Ahg926503 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 61.4329 |
Ahg496593 | Inositol monophosphatase family protein |
| 61.709 |
Ahg488768 | TCP-1/cpn60 chaperonin family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|