| Annotation |
|---|
| Description | jgi|Araly1|483401|fgenesh2_kg.4__2461__AT2G43010.2 |
| Sequence |
ACTTTCTGTC TGTACCCAAA AGAAGTAAAG AACCTCTCTT ATCATCTTCT TCTCTGTTTC TTTCATGTTT TGTGAGAGTT TTCTCAACAA TTTCTTGGTC TCTTTAGAGT GAGAGAAACG AGATAGAGGA AGATCTTCTC CTTCAACTTC TGATTCGTCC AGAAGCTTTC CTAATCTGAG ATCTGACATG GAACACCAAG GTTGGAGTTT TGAGGAGAAT TATAGTTTGT CCACTAATAG AAGATCTATA AGGCCACACG ATGAACTAGT GGAGTTGTTA TGGCGAGATG GGCAAGTGGT TCTGCAGAGC CAAACTCATA GAGAACAAAC CCAAACCCAG AAACAAGAAC GTCATGAAGG AACCCAAAGA TCCAACACCT TTCTTGAAGA TCAAGAAACT GTGTCTTGGC TCCAATACCC TCCAGATGAA GACCCATTCG AAACCGACGA CTTCTCCTCC CACTTCTTCT CAACCGTCGA TCCCCTCCAG AGACCAACCT CAGAGACGGT TAAGCCTAAG TCTGGTCCTA ACCCTCCTCA AGTCATGGTT AAGCCTAAGG CCTGTCCTGA CCCTCCTCAA GTCATGCCTC CCCCTAAATT TAGGTTAACA AATTCGCCAT CGGGAATTAG GGAAACAGAA ATGGAACAGT ACTCGGTAAC GACAATTGGA CCTAGCCATT GCGGGAGCAA CCCATCCCAG AACGATCTCG ATGTCTCAAT GAGTCAAGAT CGAAGCAAAA ACATAGAAGA AAAGCTTAAC CCGAACGCAA GTTCCTCATC AGGTGGCTCC TCTGGTTGCA GCTTTGGCAA GGATATCAAA GAAATGACTT GTGGAAGAAG CATCACAACA GACCGTAAGA GAAAAGATAT AATGGACACT GATGACTCTG TATCTCTATC AGATGTAATC GGTAACAAGT CGAACCAACG ATCAGGATCA AACCGAAGGA GTCGAGCAGC TGAAGTTCAT AATCTCTCCG AAAGGAGGAG GAGAGATAGG ATCAATGAGA GAATGAAGGC TCTGCAGGAA CTAATACCTC ACTGCAGTAA AACTGATAAA GCTTCGATTT TAGACGAAGC CATAGATTAT TTGAAATCAC TTCAGTTACA ACTTCAAGTG ATGTGGATGG GGAGTGGAAT GGCGGCGGCT CCGATGATGT TCCCCGGAGT TCAACCTCCG CCGTTCATAC GTCAGATGCA GAGTCCGGTA CAGTTACCTC GATTTCCGGT TATGGATCGG TCTGCAATTC AGAACAATCC CGGTTTAGTT TGTCAGAACC CGATACAAAA CCAGATAATC TCCGACCGGT TTGCTAGGTA CATCGGTGGG TTCCCACAGA TGCAGGCCGC GGCTCAGCCG ATGGAGATGT TAAGATTTGG TTTACCGGCG GGACAGCAAA TTCAACAACC GCCTGCGCCG ACGAAGATCA CCGACGGTTC TCGTTTGGAC CACTAGGTTG GTGAGGCACT TTTTTACTTC CTTATTTTTG GTATGTTTGT TTTTCTTATC TATTTATGAA CATACTTAAA ACGTTATAGA GTACAACGTA CAACTTCATT ACGTTATTTT ATGTATGAGT TTATGTATGT CAAAATGACA TGATGAGATT TTTTGTAAAC AACATGTTAA AAA |
| Length | 1633 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 19992378.. 19995164 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G43010.1 |
| Description | phytochrome interacting factor 4 |
| TAIR curator summary | Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses. Involved in shade avoidance response. Protein abundance is negatively regulated by PhyB. |
| Alias | [AtPIF4][PIF4][SRL2][phytochrome interacting factor 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.24264 |
Ahg485945 | Plant protein 1589 of unknown function |
| 4.24264 |
Ahg472050 | Homeodomain-like superfamily protein |
| 7.2111 |
Ahg939656 | pseudo-response regulator 7 |
| 7.93725 |
Ahg938917 | phytochrome interacting factor 3-like 6 |
| 8.24621 |
Ahg496412 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
| 10.9545 |
Ahg895509 | Chaperonin-like RbcX protein |
| 11.1803 |
Ahg497111 | Gamma interferon responsive lysosomal thiol (GILT) reductase family protein |
| 12.2474 |
Ahg933543 | Homeodomain-like superfamily protein |
| 13.4907 |
Ahg484447 | CCR-like |
| 18.1659 |
Ahg496413 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|