Detail



ID : Ahg485945

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485945|fgenesh2_kg.5__1937__AT3G55240.1
Sequence
TTTTAGAAAG AAGACTCTCT TCTAAGTTTG GGTGTTAATT CTAGGGTTTC CATTAACAAT GGCTGACTCT TCTTCTGCTT CTTACATTCA CATGGTGCAG CACATGATAG AGAAATGTTT GATCTTCCAT ATGAGCAAAG AAGAGTGTGT GGAAGCTCTC TCTAAGCATG CAAACATCAC TCCTGTCATC ACCTCTACTG TATGGAAGGA GCTGGAGAAA GAGAACAAGG AATTCTTCAA GGCATATGAG GAGAGGCAAA GCAAACAAGA GCAAATGTCG GAGGAAGAGA CAAACCAGAT GATCCAGAAG ATTATCTCGG ATTCATCTAA AGAATCCGAC GACTGATCGC GATGTTCGTT AGATCTTTAA AACCTTATAG TTTATATATA TAAATCTCAT GAAAACGATT TATCCCTGAC GCATGCATGT TTATATGTAA ATCGTTTTTT TTCATCTCTT GGCATCGGTC CAACAAGAAA GACAGCAAAA AAAGGGTGAT GACACTCCTT TTGGTACGTT ATACGTACGT GGTCCACATA ATATTGCCTT TGTATAATTA ATATATAATG AAAGATCGAT GGTGTGGCGT TTTAATTGAA TGTATCATGT GTATATATCT TCAAATAAAC TATTTATCTC TGGTCTTGGT CACCTT 
Length656
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16423568.. 16425232
Download Sequence
A.thaliana
AGI-codeAT3G55240.1
DescriptionPlant protein 1589 of unknown function
TAIR curator summaryOverexpression leads to PEL (Pseudo-Etiolation in Light) phenotype.
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg483401 phytochrome interacting factor 4
12.1244 Ahg472050 Homeodomain-like superfamily protein
30.1993 Ahg941765 Stress responsive A/B Barrel Domain
45.0999 Ahg932640 cytochrome P450, family 82, subfamily F, polypeptide 1
49.6387 Ahg939656 pseudo-response regulator 7
61.9677 Ahg930834 photosystem II light harvesting complex gene 2.1
68.0808 Ahg938917 phytochrome interacting factor 3-like 6
75.6241 Ahg496615 dentin sialophosphoprotein-related
76.6355 Ahg929366 Phototropic-responsive NPH3 family protein
77.2528 Ahg333544 IQ-domain 18
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression