Detail



ID : Ahg483715

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483715|fgenesh2_kg.4__2775__AT2G45770.1
Sequence
GCCATGGCAA CTTCTTCTGC TCACCTCTCG TTTCTCGCCG GACGGATGTC TCCGTTCTCC TCCGAACGGA TCGTATTATC CCCACAAAGA GGTGAATTTC GTCCACCAAT GTCCCGGTTC CGGTGCTCGG CCGGACCGAG CGGATTCTTC ACGCGGCTGG GTCGGTTGAT TAAGGAGAAG GCCAAAAGCG ACGTGGAGAA GGTTTTCTCC GGATTCTCTA AGACTAGAGA AAATCTAGCA GTCATCGACG AGCTCTTGCT CTTCTGGAAT CTTTCTGAAA CAGACCGAGT TCTCGATGAA TTGGAAGAGG CGCTATTGGT TTCTGATTTT GGACCCAAGA TTACTGTTAG AATTGTTGAG AGGCTAAGAG AGGATATCAT GTCAGGGAAA CTCAAATCAG GAAGCGAGAT TAAGGATGCA TTGAAGGGAA GCGTGTTGGA GATGCTCGCT AAGAAAAACA GCAAGACAGA GCTTCAATTG GGTTTTAGGA AACCAGCTGT TATAATGATT GTTGGAGTCA ACGGAGGTGG GAAGACCACA TCTCTTGGAA AGTTGGCTCA TAGATTGAAG AATGAAGGAA CTAAGGTATT AATGGCAGCA GGTGATACAT TTAGAGCAGC AGCAAGTGAC CAGTTAGAGA TATGGGCAGA GAGGACTGGG TGTGAGATTG TTGTGGCTGA AGGAGAGAAG GCTAAAGCAG CAACAGTTCT CTCAAAGGCT GTTAAAAGGG GGAAGGAGGA AGGCTATGAT GTTGTACTGT GTGACACATC TGGACGTCTT CATACTAATT ACAGTTTGAT GGAGGAGTTG ATTGCGTGCA AAAAAGCAGT GGGCAAGATT GTCTCTGGTG CACCTAATGA GATCCTACTT GTCCTTGATG GAAACACTGG TTTGAACATG CTTCCGCAAG CTAGAGAATT CAACGAGGTT GTTGGTATTA CCGGTTTGAT ATTGACGAAA CTAGATGGCT CTGCTAGAGG AGGTTGTGTG GTCAGTGTGG TTGAGGAATT GGGCATTCCC GTAAAGTTTA TCGGAGTAGG AGAAGCTGTA GAAGATCTCC AACCTTTTGA TCCGGAGGCT TTTGTGAATG CTATATTCTC CTAAACCATA AAACCTCGTC TTTTTGAAAA AGCTATCATC TTCAACAGGC CAGAGCCAAG TGGAAACATT CCCAGTGTTT TCGCCGGAGA TGCAGATGGA AGCATTCCTT AGAGTTTCTT GGAGATCTTA GGTCGTCAAG CTTTCTGCAA GGGATGCAAG ATTTGATTTT TAATGATGTG ACAAAGCTCG TTGGCACAGT GACAGTGATG ACTTACACAA GAATGTAACG AGTCAGAGAA ACTGCTTCTA TCTCACAACT ATTTTGTATA TTGTTAATGT TGTAT 
Length1385
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21136243.. 21138662
Download Sequence
A.thaliana
AGI-codeAT2G45770.2
Descriptionsignal recognition particle receptor protein, chloroplast (FTSY)
TAIR curator summarychloroplast SRP receptor homolog, alpha subunit CPFTSY. Required for LHCP integration into isolated thylakoids.
Alias[CPFTSY][FRD4][FERRIC CHELATE REDUCTASE DEFECTIVE 4]
Gene coexpression
MR
MR Locus Description
2 Ahg486537 GRAS family transcription factor
8.3666 Ahg488208 FIZZY-related 3
13.2665 Ahg473635 putrescine-binding periplasmic protein-related
15.0997 Ahg920104
15.9687 Ahg925443 ribosomal protein L14
16.7332 Ahg478355 DNA GYRASE B2
17.8885 Ahg926333 RNA-binding (RRM/RBD/RNP motifs) family protein
18 Ahg927661 polypyrimidine tract-binding protein 1
18.1659 Ahg489312 30S ribosomal protein, putative
20.4939 Ahg473408 phospholipid/glycerol acyltransferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression