Detail



ID : Ahg485476

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485476|fgenesh2_kg.5__1468__AT3G51240.1
Sequence
GTGGTAGGTA GCTAGCGACC TCTTCGTTCT TCAGTCATCA CAAGCTTTGA AAGGTTTTCA GCTACCACTC TCTTCTTATA TATTCATTAC ACATCTCTTC TCTCTATCTG TCCCTTAATT TAGTCCTTTG TTTTTGTAAT TACAATGGCT CCAGGAACTT TGACTGAGCT CGCCGGAGAG TCTAAGCTCA ACTCTAAATT CGTCCGGGAC GAGGACGAAC GCCCCAAAGT CGCTTACAAT GAGTTTAGCG ACGAAATCCC GGTGATCTCT CTCGCCGGTA TCGATGATGT CGATGGAAAA AGAGGAGAGA TCTGCCGTCA GATCGTGGAG GCTTGTGAGA ATTGGGGCAT CTTCCAAGTG GTCGATCACG GCGTCGATAC TAACTTGGTA GCGGATATGA CTCGTCTCGC TCGTGACTTC TTCGCTTTAC CTCCGGAGGA AAAGCTCCGT TTCGACATGT CCGGTGGTAA AAAAGGAGGG TTCATTGTCT CTAGTCACCT CCAGGGAGAG GCTGTGCAAG ATTGGAGAGA GATAGTGACG TATTTCTCGT ATCCGGTGAG AAACAGAGAC TTCTCACGGT GGCCAGATAA GCCGGAAGGA TGGGTGAAAG TGACGGAGGA GTATAGTGAG AGGCTTATGA GTTTGGCTTG TAAGCTTCTT GAGGTTTTGT CTGAAGCTAT GGGTCTTGAG AAAGAGTCTC TTACCAATGC ATGCGTCGAT ATGGACCAAA AGATTGTTGT TAATTATTAT CCAAAATGCC CTCAGCCTGA CCTTACTCTC GGACTCAAGC GTCACACTGA CCCTGGAACC ATTACTTTGC TGCTCCAAGA CCAAGTCGGT GGACTACAAG CCACACGTGA CAATGGCAAG ACGTGGATTA CGGTCCAGCC TGTTGAAGGA GCGTTTGTAG TCAATCTCGG CGACCACGGT CATTTTCTGA GCAATGGGAG GTTCAAGAAT GCTGATCATC AGGCGGTGGT GAACTCAAAC TCGAGTAGAC TATCCATAGC TACGTTCCAG AATCCGGCCC CCGATGCCAC CGTGTATCCA CTTAAAGTAA GAGAAGGAGA GAAGCCGATC TTGGAGGAGC CAATCACGTT TGCTGAGATG TATAAGAGAA AGATGGGAAG AGATCTGGAG CTGGCTCGCC TCAAGAAGTT GGCTAAAGAG GAACGTGACC ACAAGGAAGT TGCCAAGCCT GTCGACCAAA TCTTCGCTTA GAATCTTTGT TTCTCGCTTA CTTGTTGTGT TGGTTCCTTC CGGTTCTGTT TTGTACGTTG GTACTGAAAA TTATGCTAAG CTCGGTGTGT TTTGTGTTTC TTTATTTTCG TTCTAATCAT ATAGAAATAA TGATAATTGA TGCACTTGTC TATGACAAAA ACATCATACT TCACCTGTAT TTGACGCGTT GGGTTTATGT CAAAAGCATT AATACATCAA ACTCCATCTC TAATCAATGG CATAAATACA TTGTTGGTAA CTCTCATTGT CTAA 
Length1494
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14701036.. 14702701
Download Sequence
A.thaliana
AGI-codeAT3G51240.1
Descriptionflavanone 3-hydroxylase
TAIR curator summaryEncodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis.
Alias[F3'H][F3H][TT6][flavanone 3-hydroxylase][TRANSPARENT TESTA 6]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg487319 Chalcone-flavanone isomerase family protein
1.73205 Ahg487705 flavonol synthase 1
2 Ahg488219 Chalcone and stilbene synthase family protein
2.82843 Ahg485933 Chalcone-flavanone isomerase family protein
3.16228 Ahg939363 beta glucosidase 7
3.31662 Ahg326139 UDP-glucosyl transferase 78D2
4.24264 Ahg887428 PHE ammonia lyase 1
4.89898 Ahg331293 peroxisomal 3-keto-acyl-CoA thiolase 2
5.47723 Ahg482690 PHE ammonia lyase 1
6.32456 Ahg315469 4-coumarate:CoA ligase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression