Detail



ID : Ahg483939

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483939|fgenesh2_kg.4__2999__AT2G47590.1
Sequence
GAAAATCGAC GAGAGCTTAT CATCCTCTTC ACTCTTCTCT CTACACACAA AAAATGGATT CGAACCTTGA AGAAAAGAAC CTAAACCCAG AAACAAAATC CGCAGAAGAA GAAAACCCAC TCGCCATTAT CCATCCTTCT CTACCAATCG CATCTCTTTC TCTGACCTTG TTCCCCACAT CAACTCAATT TCTCAAACTG TTTTCTCATC ACCCAAACAA GGTTAAGATC CCTACGCAGG CCTCTTCTCT CACTCATCTC TCTCTTTATT CTTCTCCTGT CTCTCCTTCA CCTTCCAGAA TCTCTTTCAA ATCCACCATC GCTGCTAACC CTCTTCACTC CCCTCTCTCT ATCGTCCCTC GTCGTCCCGT TGATCCTTCC TCCGCCGCCG CTCTCCGCCG TGCTGCTGTC GTCTGGTTCC GCAATGACCT CCGTGTCCAC GACAACGAGT GTCTCAACTC CGCCAACGAC GAGTGCGTCT CCGTTTTGCC CGTTTACTGC TTCGACCCTA GGGATTACGG GAAATCCTCT TCCGGGTTCG ACAAAACGGG GCCTTTTCGA GCCCAGTTTC TGATTGAGTC CGTCTCGGAG CTCCGGAAGA ATCTCCAAGC GAGAGGGTCG AATCTAGTTG TCCGTGTAGG GAAACCTGAA GCTGTTTTGG TGGAATTGGC TAAGGAGATT GGAGCTGACG CGGTTTATGC TCACAGGGAA GTGTCTCACG ACGAGGTTAA AGCGGAAGGG AAGATAGAGA CGGCGATGAA GGAGGAAGGC GTTGAAGTCA AGTATTTCTG GGGAAGCACT CTCTATCACT TGGATGATTT GCCCTTCAAA ATTGAAGATT TGCCGTCAAA TTACGGAGCT TTCAAGGATA AAGTCCAGAA ACTGGAGATT AGGAAGACAA TCGCAGCGCT TGATCAATTG AAAAGCTTGC CCTCTCGAGG AGACGTTGAG CTTGGCGATA TTCCTTCTCT CCTTGATCTT GGCATTAGCC CCACTGCTAG AACCAGCCAG GAGGGGAAAC CGACAATGGT TGGAGGAGAG ACAGAGGCGT TGACTAGACT AAAGAGCTTT GCAGCGGATT GTCAGGCTCG GTTGAGCAAG GGAAACCAGA AAGGAGGCAA CAACAGTGTC TTTGGTGCAA ACTTCTCTTG CAAGATATCA CCTTGGTTAG CCATGGGAAG CATCTCTCCT CGTTCCATGT TCGATGAGCT GAAGAAAACA ATCTCTGCAT CAACCACCAC CACAACTCCA AGGAACGGAC CGGGAGATAC AGGACTCAAC TGGTTAATGT ATGAGTTGCT ATGGAGGGAT TTCTTCAGGT TTATAACCAA GAAATACAGC TCAGCGAAGA CGCAGGTCGA GGCTGGTCCG GCTACAGCCT GTACCGGTGC CTTTGCTTAA ACCTTTGAAA ACTTTCAGGT GACCGGAAAA GTTAGAACCC ATTTGTTTTT TGCCCTACTC TTGGTGTATG GTGAATCTAT TTACTATCTG GACAGGACTG AACTGCTCTC TTTTGAAACT TGAGTGTCTG GAGAATGAAT TCTAAGCTTC TTTTTTTTTT TGCTCAATCA AGTTGTCCGT TCCCTGTTCT AACATTTCGG ATACTCATTC CATAAAAAGT CTCTAGAATT TGAGACGCTC TCCTTTGCGG TTTAAGACTT GAGAATGTAT CTTAGAAAAT ATCTCAAGTA GTTGTGTCTA TGAATATTAA ATTCAGGAAT AT 
Length1722
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21921246.. 21923473
Download Sequence
A.thaliana
AGI-codeAT2G47590.1
Descriptionphotolyase/blue-light receptor 2
TAIR curator summaryphotolyase/blue light photoreceptor PHR2 (PHR2) mRNA,
Alias[PHR2][photolyase/blue-light receptor 2]
Gene coexpression
MR
MR Locus Description
10.2956 Ahg489681 ribosomal protein S1
12.1244 Ahg934672 Protein kinase superfamily protein
13.1149 Ahg933932 Ribosomal L28 family
19.799 Ahg492177 antitermination NusB domain-containing protein
20 Ahg929306 chloroplast 30S ribosomal protein S20, putative
21.7025 Ahg939440 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
24 Ahg926675 Low PSII Accumulation 3
25.923 Ahg488263 Rubisco methyltransferase family protein
26.4575 Ahg928878 Thioredoxin superfamily protein
27.1293 Ahg493880 ribosomal protein large subunit 27
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression