Detail



ID : Ahg926675

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|926675|scaffold_202236.1
Sequence
ACAGAGAGAG AGGAGCAAGA ATGGCGATGG CGATGTTACC GGCTCTCTTC TCTTCTCCTT CGATTCTAAC CAGCAGAATC AGATGCGGAG CCACAGCTAA CAGCGGCGGC GCACTCTCAT CTACTTCTTC TGACTCCGAT CTTAGGAGAG GTGTTCCCTT GTATAAGCCC AAATCATACG AGGTTCTAGC CACTGACGCC GCCAATTCTC TTGCTTTCGC TCTCCAGGAT TCAAAATCTC GTTTGGAAAT TGATTTTCCA CCTTTACCCA GTAGCATTTC TTCTTACAAG GGTTCGTCAG ACGACTTTAT TGATGCTAAT ATACAACTGG CCGTGACTGT TGTTCGCAAA CTTCAGGAGA AAATTGAGAC AAGAGCTTGC ATTGTTTTTC CTGACAAGCC TGAGAAGCGC AGGGCTTCGC AACGCTTCAA AGCGGCATTT GATTCGGTTG ATGGCATAAG TATTGGCTCT CTAGATGATA TACCTGGTAG TTCTGTCACC AATTTCTTCA GGTCCATAAG GAGTACCCTG GACTTTGATT TTGAAGATGA AAACGAAGGA ACTTGGGAGC CCAAGGAGCC TCCGACCCTT TATATATTTA TCAATTGCAG CACTCGGGAA CTCTCTTTCA TAGAGAAGTT TGTGGAAACC TTTGCCAGTT CAACCCCAGC TCTTCTGTTC AATCTTGAGC TAGATACTTT GCGTGCTGAC CTAGGGCTTC TTGGCTTCCC CCCTAAAGAT CTGCACTACC GGTTTCTTTC TCAATTTATT CCCGTCTTTT ATATCCGAAC CAGAGAGTAT TCAAAGACAG TGGCAGTGGC ACCATTTGTG TTAAACTACA ACGGAGCACT TTTCCGACAA TATCCTGGGC CATGGCAGGT GATGCTTAAG CAAACTGATG GTTCATATGC GTGTGTTGCA GAAAGCCCTA CTCGTTTCAC GCTGGGTGAA ACGAAGGAAG AGCTGTTGCA GGTTCTGGGA CTACAAGAAG AGAAAGGAAG CTCACTCGAG TTCCTGCGCA GGGGATACAA GTCGGCAACT TGGTGGGAAG AGGATGTGGA GCTTGAGGCA TCATCTAATT GGCGTAACTG AACGATGGCC AAGTCATGGA TTCACACTTT TGGTATGTTT GTTAAGTCCC TCAAGATCGA GATATTTACA CTTGTATATG TGCAAAGTTG GTAGAGAGAG TTTGGGAGAT GTTAATGGGA ATGATAAAGG ATAGTTTGAA AATGATGTCT ATATAAACTC AGTCCA 
Length1256
Protein Sequence
Protein Residue
Map Locationscaffold_2: 14764640.. 14767067
Download Sequence
A.thaliana
AGI-codeAT1G73060.1
DescriptionLow PSII Accumulation 3
TAIR curator summary
Alias[LPA3][Low PSII Accumulation 3]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg485130 DnaJ/Hsp40 cysteine-rich domain superfamily protein
11.1355 Ahg489681 ribosomal protein S1
19.2094 Ahg939440 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
21.0713 Ahg950897 D-ribulose-5-phosphate-3-epimerase
24 Ahg483939 photolyase/blue-light receptor 2
25.5147 Ahg493880 ribosomal protein large subunit 27
25.6515 Ahg922337 Single hybrid motif superfamily protein
26.4575 Ahg946135 RAB GTPase homolog E1B
26.533 Ahg482500 glycine decarboxylase complex H
26.6833 Ahg475805 ribulose bisphosphate carboxylase small chain 1A
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression