Detail



ID : Ahg484176

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484176|fgenesh2_kg.5__168__AT2G02710.2
Sequence
GAGCAACGCG ACAAAATCAA TCGTCTTCTT CCGATAGCCA CAGAAAAAAA AATCAGACAA GAAGAAAGAA GAACGTTTCT TCTAAAAGAG AAAGATTACA TCAAATTGAC ACTAATTTCT CATTTCTCAA TCCCGTATCT CTCATTTCAT CATCTTCTTC TTCTTTCTCC TTACTTGAGA ATCTCTGGTT TTTCTTTCTT TTTTCCCATG AAAACATTTT CTTGATTCCC GATTTCAAAT TTCCATACCT GGGTTTGGTG TTTCGGATTC ACTTTGAAGA AAAAGTTTTT CAATTTCGCC TCAAAACCCA CATGGGATTG GCACTAAACA CTGGACTGAC AACAAGAGCA AGAGTAATAG TCATCGAGTG TTTATTACGA TTATGTCCTC AACGAAATCT TCAGAAGAAG ATTCCTTTAA CGGTCGATAC ACTCTATGGA TCACAGAAGC TTTAGAAGAG CTTCCTCACA ATTTCACAAT CACCGACCCG TTTATTTCGG GTCACCCGAT TGTTTTCGCG AGCTTAGGGT TTTTGAAAAT GACTGGGTAT TCACGAGAAG AAGTCATCGG AAGAAACGGG AAAGTTTTTC AAGGACCTAA GACTAATCGA AGATCGATCA TGGAGATTCG TGAAGCTATT CGTGAAGAGA GATCTGTTAT GGTTAGCTTG TTGAATTATC GTAAATCTGG ATCTCCGTTT TGGATGTTGT TTCATATGAG TCCTGTTTTT GGGAGAGATG ATGGTAAAGT CATCAATTTT GTGGCGGTTC AGGTCCCGAT TTCGGGACAA GAACATCGGA AGCTCGGAGA TATGTCGTCG GATCATTCTG AGTTGGTGTT TGGTTCTTGT CGAAGAGAGG TTTGTTTTGG TAGTTTCGTG CATCAGAAAC AAGCTTCACC AGTGGAATGT GATGATGAGC AAGGATTAGA GGATTGGGAA CACTGTGAAG CGAGTGAGTC TGAGAAGCTG AAAGCTGTGG AAGCAATTAA CAATGTGTTA TCTATTTTAA CGCGTTACAG CAAGTTGAGT GGTAGATTAG TCTGCGGAAA GCGGTACTGC TTGCGAGGAG TAGATTGTCT AAGTTCGTCG TTGGTTATTT CTCTCGGTAG AATCAAACAA AGTTTCGTAT TAACCAATCC ATGCTTACCC GACATGCCTA TCGTTTATGC GAGTGATTCC TTTTTGACAC TGACCGGTTA CAAGAGACAG GAAGTGTTGG GTCAAAACTG CAGATTTCTG AGTGGGGTTG ATACCGATTC CTCAGTACTA TACGAGATGA AGGAGTGCAT CTTAAAGGGA CAATCATGCA CAGTTCAAAT ACTAAATTAC AGTAACAGAA AAGATAAGAG CTCATTCTGG AATCTTCTTC ACATCTCACC AGTTCGTAAT GCTTCAGGCA AGACAGCATA TTTTGTGGGT GTTCAGGTGG AAGGAAGTTG TAGAAATACT GAAAGTAAAG AGCTGAGACC AGAGACAAGG CAACTGAGTG TGGTCGGTGC GGTTAGAGTT GCGGTTAGGA GCTCATTGAT GGTAACATGC TAATGTACGC CCGAAAGAAA ATGTCTCTTA GAAAGAAAAG TAGAAAAGAG TATGATGTGA ATTGGATATA CATCTTTACT AT 
Length1622
Protein Sequence
Protein Residue
Map Locationscaffold_5: 933467.. 935837
Download Sequence
A.thaliana
AGI-codeAT2G02710.1
DescriptionPAS/LOV protein B
TAIR curator summaryEncodes a putative blue light receptor protein.
Alias[PLP][PLPA][PLPB][PLPC][PAS/LOV PROTEIN][PAS/LOV PROTEIN A][PAS/LOV protein B][PAS/LOV PROTEIN C]
Gene coexpression
MR
MR Locus Description
17.4356 Ahg354720 Transcription factor TFIIE, alpha subunit
20.7605 Ahg479059 lectin protein kinase family protein
32.9545 Ahg917381 beta-galactosidase 4
36.7423 Ahg472044 ketose-bisphosphate aldolase class-II family protein
41.0122 Ahg921070 PLATZ transcription factor family protein
44.1928 Ahg944272 Chaperone DnaJ-domain superfamily protein
45.3652 Ahg488176 decapping 2
46.1302 Ahg481671 auxin response factor 10
46.9894 Ahg470333 Protein of unknown function (DUF789)
54.6626 Ahg486058 Ca-2+ dependent nuclease
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression