| Annotation |
|---|
| Description | jgi|Araly1|913522|Al_scaffold_0001_3776 |
| Sequence |
ATGCAGATTC TGTTTGTTGG TTATGGAGTG GAAGCAAAAC AATCAGCCGG ATATTGTGCT ATGTATGATA TCTGTGGAGC AAGAAGTGAT GGGAAAGTAC TAAATTGCCC TTTCAACATT CCTGCTGTGA AGCCTGATGA TTTGTTATCT TCAAAGATTC AAAGCTTATG TCCAACAATC ACTGGCAATG TTTGTTGCAC AGAGACTCAA TTTGATACAT TACGTTCACA AGTTCAACAG GCTATTCCTT TCATTGTAGG TTGTCCAGCA TGTTTGAGGA ATTTTCTGAA TCTTTTCTGT GAACTTACTT GTTCTCCGGA TCAGAGTTTA TTCATCAATG TAACTTCTAC TACAAAGGTC AAGAATAATT CGACTGTAGA TGGGATTCAG TACTATATAA CTGATGATTT TGGAGCGGGG ATGTATGAAT CTTGCAAAAA TGTGAAATTC GGTAGCTCTA ATAGCCGAGC TTTAGACTTT CTCGGAGCCG GTGCAAAGGA TTTTAAGGAG TGGTTTGCAT TTATTGGTCA GAAAGCGGGT GTCAATGTGC CAGGCTCACC GTATGGGATT GCGTTTTTGC CAACACCACC AGTGTCATCT GGAATGAGGC CTATGAATGT GTCTACTTAT TCATGCGGTG ATGAGTCTCT TGGCTGTTCT TGTGGTGATT GTCCTTCTGC AGCTACTTGC TCCAGTAAAG CAGAAGTTCC TACTCAGAAA AAGCACTCTT GTTCTATCAA AATTGGATCA CTTGAGGCGA AATGTGTTGA TTTCATACTA GCCATTGTGT ATATTGTATT GGTTTCACTG TTTCTCGGAG GCGGTTTACT TCACCGAGTA AGGGGTAAGA AAAAGACCTC ACAGATGAGA CCATCGTCAG AAGCTGGTGG AGAGCAAAGT TCTGCTAATT TGCAAAAACC AGACACTATC CATGCACAGA TGTTACAAAA TACTCCACAG AGAAACTGGG GTCAGCTATC GACAGTACAA GGACACTTGG CCAATTTTTA CAGGAAGTAT GGGATTTGGG TAGCAAGACA CCCAACTCTT GTTTTGTGTT TGTCAGTCTC TGTAGTTCTT CTCCTTTGTG TGGGTCTGAT CCGATTCAAA GTGGAGACAC GGCCTGATAA GCTATGGGTA GGATCAGGGA GCAGAGCTGC TGAAGAGAAA CAATTCTTTG ACACCCATCT TGCTCCTTTC TACAGAATTG AACAGCTAAT AATAGCAACA GTTCAAAAAT CTTCTCACGA AAAGGCGCCA GAGATTTTGA CAGATGACAA TATTAAGTTA CTTTTTGACA TACAAAAGAA GGTCGATGGA CTTCGGGCAA ATCACTCAGG TTCAATGGTT TCTCTGACAG ATATTTGCAT GAAACCCCTG GGAGAGGATT GTGCCACACA GAGTGTTCTG CAGTATTTCA AGATGAAACC AGAAAATTAT GATGACTTTG GAGGCGTCGA TCATGTTAAA TATTGCTTTG AGCATTTCAC CTCGACAGAT TCATGTTTGA GTGCATTTAA GGGTCCACTT GATCCAACTA CTGCACTGGG AGGTTTCTCA GGGAACAGTT TTAGTGAGGC TTCTGCTTTT CTTGTGACTT ATCCTGTGGA CAATGCTGTT GACAATAAAG GTAACAAAAC TGAGAAAGCA GTAGCATGGG AGAAAGCCTT TATCCAACTG GCCAAGGATG AGTTGTTGCC AATGGTTAAA GCAAAAAATT TAACTCTTTC TTTCTCTTCG GAAAGTTCTA TTGAAGAAGA ATTGAAAAGA GAAAGCACAG CAGATGTCAT AACTATAGCC ATAAGTTATC TTGTCATGTT TGCCTATATA TCACTCACAC TTGGAGATTC ACCTCGCTTA AATTCCTTTT ACATAACATC CAAGGTTCTG CTTGGTCTAT CTGGTGTTCT ACTTGTCATG CTTTCCGTCC TCGGCTCTGT AGGATTTTTC AGTGCCGTTG GGATGAAATC GACTCTTATA ATAATGGAAG TTATACCTTT TCTTGTTTTG GCTGTCGGTG TTGATAATAT GTGCATACTG GTTCATGCTG TGAAGAGGCA AGAGCAAGAG CTGCCTTTGG AAAGACGAAT AAGCAATGCC CTTATGGAAG TTGGACCATC GATTACTCTT GCAAGTTTAG CCGAGATTTT AGCTTTTGCT GTTGGTGCTT TTATTAAAAT GCCAGCTGTT CGAGTGTTCT CCATGTTTGC TGCATTGGCT GTCCTTTTGG ACTTTCTTCT CCAGATTACT GCGTTTGTAG CTTTGATAGT TTTTGACTTC CAACGGACAG AGGATAAGCG GGTTGATTGC TTCCCATGTA TTAAGACATC GAAATCATCT AATAGCGCTG ACAAAGGGGT TGGTCAGAGA AAAGCTGGCC TTTTGACTCG ATATATGAAG GAAGTCCATG CACCCGTTCT TAGCCATTGG GCAGTCAAAA TATTGGTTAT TGCCTTCTTC TTTGGCTTAG CTATGGCTGG AATTGCAATG TCCACTCGGA TTGAGCCTGG CTTGGAGCAA CAGATTGTTC TTCCTCAAGA CTCATATCTT CAGGGTTACT TCAACAATAT TTCAACATAT CTTCGTATTG GTCCACCTTT ATACTTTGTT CTGAAGAATT ATAACTACAG CTCAGAATCA AGACAGACTA ATCAACTTTG TTCCATTAAC AAGTGTGATT CTAACTCTCT TTTAAATGAG ATTGCAAGGG CTTCTTTGAC TCCAGAACTA AGCTACATAG CTAAGCCAGC TGCTTCATGG CTTGATGACT TTCTCGTGTG GTTATCTCCC GAGGCGTTTG GCTGTTGCCG AAAGTTTACA AATGGTACCT TTTGCCCCCC TGATGACCAG CCTCCTTGTT GCTCTCCTGA TCAAGGCAGC TGTGGCCTAA GTGAAGTATG CAAAGATTGT ACCACGTGCT TCCGTCATGC AGATTTAAGT AGTGACCGCC CATCCACAAC CCAATTCAAA GAGAAACTTC CTTGGTTCCT CAACGCGCTT CCTTCCGCTG ATTGTGCTAA AGGTGGACAT GGTGCTTATT CTAGTAGTGT TGATTTACAA GGCTATGAAA ATGGTATAAT TCAAGCTTCA TCGTTCCGCA CTTATCACAC ACCCCTTAAC AAGCAGGCTG ACTTTGTTAA TTCAATGAGA GCTGCTCAAG AATTTAGTGC AAAAGTTTCC CGTTCCTTAA AGATGGAGAT ATATCCATAT TCAGTGTTTT ATATGTTCTT TGAGCAATAT CTTGACATAT GGAAAACTGC ACTAATCAAC CTCTCCATAG CCATTGCTGC CGTGTTTGTC GTGTGTTTAA TCATCACATG CAGCTTTTGG AGCTCCGCAA TTATTTTGCT GGTGATCGCA ATGATCATTA TTGATCTCTT GGGAGTTATG GCAGTCTTTC ATATCCAGCT AAACGCACTA TCGGTTGTAA ATCTAATCAT GTCCGTGGGC ATAGCGGTTG AGTTTTGTGT GCACATAACA CACGCTTTCT CGCACTGGGG ACAGAAACCA TCGGATGAAA GAGGCGTTGG GTGGGATGGG AGCTTCAGTT TTCAGTGGAA TTACATTGAC GAAGCTAGTT GGGGTAATTG TGCTCAGTTT CTCAAGATCA GAAGTCTTTG TGGTCTACTA CTTCAAGATG TATCTGGCAC TAGTCCTCCT CGGTTTCTTG CACGGCCTTG TATTTTTACC GGTGTTCTTG AGCATGTTTG GTCCTTCTCC AAGACATGTA GAAGGGGAAA GGCAAGATCA TCGACCTTCG CTGCCCATCC ATTTGTAAAT GGTTAA |
| Length | 3786 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 20664121.. 20672559 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G42470.1 |
| Description | Patched family protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.34847 |
Ahg484657 | ATP binding cassette subfamily B19 |
| 14.1421 |
Ahg494617 | Protein of unknown function (DUF3741) |
| 21.7256 |
Ahg484449 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 22.3607 |
Ahg312387 | Restriction endonuclease, type II-like superfamily protein |
| 23.8328 |
Ahg478879 | Ribosomal protein L18ae/LX family protein |
| 25.4558 |
Ahg934183 | Leucine-rich repeat protein kinase family protein |
| 27.6225 |
Ahg470295 | FZO-like |
| 31.1127 |
Ahg925647 | Zinc-binding dehydrogenase family protein |
| 32.218 |
Ahg486880 | Leucine-rich receptor-like protein kinase family protein |
| 34.8712 |
Ahg945247 | SET domain protein 16 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|