Detail



ID : Ahg482567

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482567|fgenesh2_kg.4__1627__AT2G35960.1
Sequence
CTCACTCTCT CCATCACACA TACATCTTCT CCATCCATTA CACAACGAAG CATAGTGGCA AAGCCGTAAA TACATAATAC CAATGTCCAA AGATTGCGGG AACCACGGCG GCGGCGGCGG AGGAGGAACC GTCAGTCGAA TCTGCGGAGC AATCATTGGC TTCATCATCA TCGTCTTGAT AACAATCTTC CTCGTTTGGG TAATCCTCCA ACCAACAAAA CCAAGATTCA TCCTCCAAGA CGCCACCGTC TACGCCTTTA ACCTCTCGCA ACCTAACCTA CTCACCTCAA ACTTTCAGAT CACAATCGCT TCACGTAACC GCAACTCCAG AATCGGAATC TACTACGACC GGCTTCACGT CTACGCTAGT TACCGGAACC AGCAAATCAC TTTACGTACA GCCATTCCTC CGACGTACCA AGGCCATAAA GAAGACAACG TTTGGTCTCC TTTTGTATAC GGAAACTCCG TCCCTATCGC TCCTTTCAAC GCGGTGGCTC TTGGCGACGA GCAAAATCGC GGGTTTGTCA CGTTGATTAT ACGCGCCGAT GGACGCGTGA GGTGGAAGGT CGGGACTCTT ATTACAGGGA AGTATCATCT CCTTGTTCGT TGTCTCGCGT ACATAAATCT GGCTGATAAA GCCGCCGGAG TTCATGTCGG CGAAAACGCC GTTAAGTACA TGTTGGTCAA TAAGTGCAGT GTCAATGTTT AGGAGGTAAT AAAAGGACAC AACTTTGACA CCGTTAAAGT TTGC 
Length754
Protein Sequence
Protein Residue
Map Locationscaffold_4: 16171667.. 16172417
Download Sequence
A.thaliana
AGI-codeAT2G35960.1
DescriptionNDR1/HIN1-like 12
TAIR curator summaryEncodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression is not altered in response to cucumber mosaic virus or spermine.
Alias[NHL12][NDR1/HIN1-like 12]
Gene coexpression
MR
MR Locus Description
3.60555 Ahg930186 cell wall-plasma membrane linker protein
3.87298 Ahg905237 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
5.83095 Ahg490517 beta-amylase 2
9.48683 Ahg938360 Eukaryotic aspartyl protease family protein
10.4881 Ahg929366 Phototropic-responsive NPH3 family protein
10.583 Ahg485907 Pectin lyase-like superfamily protein
11.8322 Ahg481907 fatty acid desaturase 3
11.8743 Ahg317881 alpha/beta-Hydrolases superfamily protein
12.4097 Ahg485617 Eukaryotic aspartyl protease family protein
16.5227 Ahg490641 proline-rich protein 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression