| Annotation |
|---|
| Description | jgi|Araly1|495894|fgenesh2_kg.8__1710__AT5G57940.2 |
| Sequence |
TCTGGTCACT TTATACCCAC TTTCATCTTT GTCATGTTCG TAGTTGTTCC TCTGGTTATC CTCATCAACG GGACCTTTGA ATTCGTCTAG CCATTTTGCT TCATGATTAG AGTCTGTTAA AGCTGTGTTC TTTCTTCATC GATTTGAGCA ATTGATCGTG GAAGGCTCTT GAGTTCCTTA TTAGCAGCAA TCATGGCAGG CAAACGAGAC AATTTTATGA GGGTGGATGA TTTGGACTCT AGGTTACCAT CATCATCTGT AACCTTCCAA CAGAACTACG CCTCCAATTT CAGTGGACAA CTTCATCCTA TTCATGGAGC CAATGACACA TCTAGATCAT TCAAGAAAGG GATCCAAAAG GGTTCCAAAG GGCTTAAATC GATAGGCCGT TCACTCGGTT TCGGTGTTTA TAGAGCAGTG TTCCCAGAAG ACCTTAAAGT ATCTGAAAAG AAGATATTTG ATCCTCAGGA CAAAATCCTT TTGTATTGCA ATAAGTTATT CGTCGCCTCA TGTATTCTTT CAGTGTTTGT GGACCCTTTT TTTTTCTATC TTCCTGTGAT TAATGCTGAG TCCAAGTGCC TGGGTATTGA CAGAAAACTG GCTATCACAG CAAGTACATT GCGGACTTTT ATCGATGTGT TTTATCTAGC TCACATGGCT CTCCAGCTCA GGACTGCTTA TATTGCACCT TCATCACGGG TCTTTGGGCG AGGTGAACTC GTGATTGATC CTGCGCAGAT AGCAAAGAGA TATTTACAGC GTTGGTTTAT CATTGATTTT CTCTCAGTAC TTCCTGCCCC TCAGATTGTA GTTTGGAGGT TCTTGCAAAG CTCAAACGGA TCGGATGTAT TGGATACAAA GCAGGCCTTG CTTTTCATTG TTTTGGTCCA GTATATACCG CGATTCCTAC GTGTCTTACC CTTGACGTCA GAATTGAAAA GGACAGCAGG TGTCTTTGCG GAAACTGCTT GGGCTGGTGC CGCTTATTAT CTGCTCTTAT ATATGCTTGC AAGTCATATA GTTGGAGCTT TTTGGTACCT TTTAGCCTTG GAACGTAACG ACGCCTGCTG GCAGGAGGCC TGTAACCATG CAGGGAATTG CAGCACAGAT TTCTTGTACT GTGGCAATCA AAACATGGAC GGCTATGCTG TTTGGAACAG AACCAAGGAA TCTGTTCTTC AGTCCAAGTG CCGAGCTGAC CTCGATGATA ATAATCCTCC ATTTGACTTT GGGATTTATA CACAGGCTTT ATCGTCTGGA ATTGTCTCGT CTCAAAACTT CATCGTAAAA TATTGTTATT GTTTGTGGTG GGGCCTTCAG AACTTGAGTA CACTTGGACA AGGGCTTGAA ACCAGTACAT ACCCAATGGA AATTATATTT TCCATAGCGC TCGCCATTTC TGGGTTGATC CTCTTTGCTC TTCTCATCGG AAACATGCAG ACATATCTCC AATCTCTTAC CATCCGGCTC GAAGAAATGA GAGTAAAGAG GCGTGACTCA GAACAATGGA TGCATCACAG AATGTTACCA CAAGATCTTA GGGAGCGTGT GAGGCGCTAT GACCAGTATA AATGGTTGGA GACACGTGGT GTAGATGAAG AGTATCTCGT TCAGAATCTC CCCAAGGATC TCCGGAGAGA CATCAAGCGG CATCTTTGTC TGGCTTTAGT GCGCAGGGTT CCATTGTTTG AGAGCATGGA CGACAAGCTG CTGGATGCGA TCTGTATGCG ACTAAAACCA TGCTTGTTCA CAGAGAGTAC CTACTTAGTA CGGGAAGGAG ACCCTGTAGA CGAGATGCTA TTCATAATAC GTGGTCGCCT CGAGAGTGTG ACAACAGATG GAGGCAGGAG CGGTTTCTTC AACCGCAGTC TCCTTAAAGA AGGAGAATTC TGTGGGGAAG AGCTTCTGAC ATGGGCATTG GATCCAAAAT CAGGTGTAAA TCTCCCGTCT TCCACGAGAA CCGTGAAAGC TCTGACAGAA GTAGAGGCGT TTGCGCTGAC CTCCGAGGAG CTGAAGTTTG TTGCAAGCCA GTTTCGGCGC CTACATAGCA GGCAAGTGCA GCACACATTC AGATTTTACT CTCACCAGTG GAGGACTTGG GCAGCTTGTT TCATCCAGGC TGCCTGGCGT AGATACTGCA AGAGGAAGAA GATGGAAGAG GCCGAAGCCG AGGCCGTGGC TGTGCCCAGC TCAACCGCTG GACCTTCATA CTCCATCGGG GCTGCATTTC TTGCCACTAA GTTTGCGGCT AATGCGCTTC GCACCATTCA CAGGAACCGG GACACAAAGA TTAGGGATTT GGTGAAGCTG CAGAAGCCTC CCGAGCCTGA TTTCACTGCT GACTGATGAT TGAGCAGCTT GTAGACAATG CTTGTTTATA ATTTATAGGA AGCATTACGA TTGACATAAA CAAATATTTC ATGGCTTTAG AGCTACTTGT ACTGTCTGTA AAAT |
| Length | 2454 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 17259164.. 17263088 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G57940.1 |
| Description | cyclic nucleotide gated channel 5 |
| TAIR curator summary | member of Cyclic nucleotide gated channel family |
| Alias | [ATCNGC5][CNGC5][cyclic nucleotide gated channel 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg482617 | Family of unknown function (DUF662) |
| 2.44949 |
Ahg932816 | Transducin/WD40 repeat-like superfamily protein |
| 3.60555 |
Ahg490219 | pre-mRNA splicing factor-related |
| 4.47214 |
Ahg481716 | |
| 6.48074 |
Ahg928231 | Plant protein of unknown function (DUF828) |
| 8.3666 |
Ahg492913 | VPS54 |
| 15.2971 |
Ahg486261 | |
| 18.3303 |
Ahg496527 | Leucine-rich repeat protein kinase family protein |
| 24.2899 |
Ahg924151 | Leucine-rich repeat transmembrane protein kinase |
| 28.8444 |
Ahg493797 | Pectin lyase-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|