Detail



ID : Ahg486463

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486463|fgenesh2_kg.5__2455__AT3G59970.3
Sequence
GAGTGAGTAA AGGAACCAGA GAGACCAAAC TTGCCTCTCC ACCACCACTT TCCGAATCTG GATTTGGATT TGGATCTCAT TTCGATTCGA CAATGAAGGT GGTTGATAAG ATCAAATCCG TGACGGAGCA AGGCCAAACA GCTTTCTCCT TCGAGTTTTT CCCACCCAAG ACGGAGGATG GCGTCGAGAA TCTCTTTGAA CGAATGGATC GATTGGTCTC TTATGGACCT ACCTTCTGCG ATATCACTTG GGGTGCCGGA GGATCCACCG CCGATCTCAC TCTCGAGATC GCTTCTAGGA TGCAGAATGT TATCTGCGTC GAGACTATGA TGCATCTCAC TTGTACCAAC ATGCCGATTG AGAAGATTGA CCACGCGCTT GAGACGATTA GATCTAATGG AATTCAGAAT GTGCTTGCGC TTAGAGGAGA TCCGCCTCAT GGACAGGATA AGTTCGTTCA GGTTGAAGGA GGATTTGCTT GTGCTTTGGA TCTGGTGAAT CACATTCGAA GCAAGTATGG TGATTACTTT GGAATCACTG TTGCTGGTTA TCCTGAGGCT CATCCTGATG TTATTGAAGC TGATGGACTT GCTACTCCTG AATCTTATCA GAGTGATCTT GCTTACCTGA AGAAAAAGGT TGATGCTGGA GCAGATTTGA TTGTGACTCA GCTTTTCTAT GATACTGATA TATTCCTCAA ATTTGTGAAT GATTGTCGCC AAATCGGGAT AAATTGTCCC ATTGTTCCTG GAATTATGCC CATTTCCAAC TACAAGGGGT TCTTGCGTAT GGCTGGTTTC TGCAAGACCA AGATACCTGC TGAGCTCACT GCTGCCTTAG AGCCTATTAA GGATAATGAC GAGGCTGTCA AAGCCTATGG TATTCACTTT GCAACAGAAA TGTGCAAAAA GATTTTGGCC CATGGAATCA CTACCCTTCA TATTTACACA TTGAACGTGG ACAAATCAGC TATTGGGATA TTAATGAACC TTGGTTTGAT TGATGAGTCA AAAATTTCTC GTTCTCTACC TTGGAGACGC CCTGCAAATG TTTTCCGTAC TAAGGAAGAT GTTCGCCCAA TTTTCTGGGC AAATCGTCCA AAGAGCTATA TATCTAGAAC AAAGGGCTGG AATGACTTCC CACATGGACG TTGGGGTGAT ACACGCAGTG CATCATATAG TACACTTTCA GATTATCAGT TCACACGCCC AAAAGCACGT GACAAGAAGC TTCAGCAAGA ATGGGTTGTC CCATTGAAAA GCATTGAAGA TGTTCAAGAG AAATTCAAAG AGCTCTGCAT TGGAAACTTA AAAAGCAGTC CATGGTCTGA ATTAGATGGA CTCCAGCCAG AGACAAAGAT CATAAACGAG CAACTCGGGA AAATCAACTC CAATGGTTTC CTGACCATCA ATAGCCAACC ATCAGTCAAT GCAGCTAAAT CCGATTCCCC AGCTATTGGA TGGGGTGGTC CTGGTGGTTA CGTCTACCAG AAAGCTTATC TGGAGTTCTT CTGTTCAAAG GATAAGTTAG ACACACTTGT GGAGAAATCC AAAGCTTTTC CTCTTATCAC CTACATGGCC GTGAACAAAG CAGAGAATTG GGTATCAAAC ACCGATGAGT GCGATGTGAA TGCAGTTACT TGGGGAGTGT TCCCAGCTAA GGAGGTTATT CAACCGACGA TCGTGGATCC AGCCAGTTTC AAAGTCTGGA AAGACGAAGC GTTTGAGATT TGGTCAAGAA GCTGGGCTAA TTTGTACCCA GAAGATGACC CTTCTAGAAA ATTGCTCGAG GAGGTGAAGA ACAGCTACTA TTTGGTAAGC TTAGTGGACA ACGATTACAT CAATGGTGAT ATATTTGCTG TCTTTGCTTG ATCTCCGAGA AAACCAACGG CAAAGAGGAA ACATTCGATT TCGCGATTTG TTTTGTACCT TTTAAAGTTA CTTTTGATTC GTAATAACCT TATTTTGATG AATCAACAAA AACATCAGTT TGATTGCAAT GAAAAAAATC GCCTTAGCGG TCTGTTCTTT C 
Length2031
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18548553.. 18551721
Download Sequence
A.thaliana
AGI-codeAT3G59970.3
Descriptionmethylenetetrahydrofolate reductase 1
TAIR curator summarymethylenetetrahydrofolate reductase MTHFR1 mRNA, complete
Alias[MTHFR1][methylenetetrahydrofolate reductase 1]
Gene coexpression
MR
MR Locus Description
17.2047 Ahg947488 beta-1,3-glucanase_putative
25.1794 Ahg348313 RNA-binding (RRM/RBD/RNP motifs) family protein
27.3313 Ahg488656 Cobalamin-independent synthase family protein
39.4208 Ahg930906 NAD(P)-binding Rossmann-fold superfamily protein
40.4969 Ahg920787 Ribosomal protein L6 family protein
44.8776 Ahg485062 tubulin beta chain 3
45.3431 Ahg484572 ribosomal protein L12-A
48.4974 Ahg936275 2-oxoacid dehydrogenases acyltransferase family protein
49.7795 Ahg483939 photolyase/blue-light receptor 2
53.591 Ahg475501 Nucleotide-diphospho-sugar transferases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression