Detail



ID : Ahg486924

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486924|fgenesh2_kg.6__58__AT5G01520.1
Sequence
GTTGCCGTTC CTTCTCGAAC AAAAAAGAGC TTTAGACTTT TGATATTACG TGTGCTCTAC GCGAATCTAT CAATATCTAA ATCATCTCCT TCTCTCTCCT CCTTCTTCTT CCTGTCGCTA CCTTGTGGTT GAGTGAGTAA ATATCTGGAA ACCATCCATG GAAATGGGAG AGAGAATCAA TTCTTGTTGT TGTTAGAGGG TTTGCGATAT TTTAGGCTTC TGTCGGTGAT CTCGACAAAA ATTAAACAAA GGAGCTGCTA GGTTTTTTCT CTCTCTCCCA TTCGGAAGGA AGCTGGTTTA TGTTGAATCG TCTTTGTTCG GAAAATGCGA AAATCGTTTA AGGATTCACT CAAGGCTCTT GAAGCTGATA TCCAGTTCGC CAACACTCTG GCATCAGAGT ATCCAGAGGA GTATGATGGT GGCTACGTTC AGATGAGATT ATCTTACAGC CCCGCGGCTC ATCTCTTTCT CTTCCTTCTT CAGTGGACTG ATTGTCATTT CGCTGGCACT TTGGGATTGC TTAGGATCCT TATTTATAAG GCATATGTTG ATGGGAAGAC CACAATGTCG CTACATGAAC GCAAAGCTAG TATCAGAGAC TTCTATGATG TGTTGTTTCC TTCGCTATTG CAACTTCACG GAGGGATAAC CGATCTAGAA GAAAGGAAGC AGAAGGAGAT ATGCGACAAA CGATACCGGA AAAAGGACAG AACAGAGAAA GGAAAGATGT CGGAGATCGA TTTGGAGAGG GAAGAAGAGT GTGGAATTTG CTTGGAGATT CAAAATAAAG TTGTTCTCCC TACTTGCAAT CACTCCATGT GTATAAACTG CTACAGAAAC TGGCGTGCAA GGTCACAGTC GTGCCCGTTC TGTCGAGGCA GCTTGAAAAG AGTGAATTCT GGTGATCTGT GGATATACAC TTCTAGCGCC GAGATTGCAG ATTTACCGGC GATTTACAAG GACAATCTGA AGAGGTTGTT GATATACATT GACAAGTTGC CTCTCGTTAC TTGTGATCCA AATCTAGTCC CTTATGCTCC TCTTCCTCGG TGAACGAACA CATTCTCTTT ATTTCTTGTT ATGCACATAG CAATTTCTAT CAAAATTTCA TCTATTTGTG TCCACTTTGT ATATAATATT TATGTGTTTC CAGCCCTTGT GCTTCTAGTT AATCGTCTCT GATTTGGGTT TGTATATAAC AACCGTTGGT TATTGACATT TAGATCCAAA ATTCGATATC ACATTTGCTT ATT 
Length1253
Protein Sequence
Protein Residue
Map Locationscaffold_6: 200969.. 203130
Download Sequence
A.thaliana
AGI-codeAT5G01520.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias[AIRP2][AtAIRP2][ABA Insensitive RING Protein 2]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg941255
7.93725 Ahg496967 Dehydrin family protein
8.12404 Ahg495299 CAP160 protein
8.48528 Ahg487924 CBL-interacting protein kinase 5
11.0454 Ahg333508 Late embryogenesis abundant protein
13.0767 Ahg921008 cold-regulated 47
13.4164 Ahg483960 TSPO(outer membrane tryptophan-rich sensory protein)-related
13.9642 Ahg924738 flavin-monooxygenase glucosinolate S-oxygenase 4
16 Ahg927111 alcohol dehydrogenase 1
17.3205 Ahg325294 Late Embryogenesis Abundant 4-5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression