| Annotation |
|---|
| Description | jgi|Araly1|488128|fgenesh2_kg.6__1262__AT5G13120.1 |
| Sequence |
TTTTGAGCTC CAATGGCGGC CTTATCGATG ACTCTGTCAA ATCCGAAGTC GCTGTCAGCT GCTCCACGAA GACTTTCTCC GATCAATACC TCCGCTCTCA CATCTACCTC TTTCCGATTG CGCACCAAAT CTTCCTTCGA TTCAATCTCG TTCTCGTCTT CAACTCCCTT CTCCGCGTCA TCGCTCCTCC TTCACACGTC TTCTACCAAA AGAAACCACC GCTGCTTCTC GATTCAATCC AATTCTGAGA TTGTTAGCGA ACCGCAATCG AAAATAACAC ACAAGGTGTA TTTCGATATA AGTGTTGGAA ATCCAGTGGG GAAGTTAGCT GGGAGGATTG TTATTGGATT GTATGGTGAT GATGTTCCCC AAACTGTGGA GAACTTTCGT GCTCTATGCA CAGGTGAAAA GGGATTTGGC TACAAGGGTT CTACATTCCA TCGTGTCATC AGAGATTTCA TGATTCAGGG AGGAGACTTT GAAAAGGGCA ATGGAACTGG AGGTAAAAGT GTATATGGCC GTACATTCAA GGATGAGAAT TTCAAGTTAT CCCATGTCGG ACCAGGAGTT CTGAGTATGG CAAATGCTGG CCCTAATACA AATGGAAGTC AGTTCTTTAT CTGCACTGTT AAGGCAAGAA TCTCACTCAC TATCATCCTC GAGCATCAAC AATCCCTAAG AATAATACCA TCCAAGCTTT ACGTCATGGT TGGACGGAAG GCATGTGGTG TAATAGAAGG AATGGAAGTG GTGAAGCTGA TAGAGGAACA AGAGACAGAC AGAGGAGACC GTCCCAGAAA GAAAGTGGTG ATAGCAGACT GTGGTCAACT TCCAATGTCT GAAGCTTAAA AGCAAGATCA TTAACCAAAA CCTTGTAGAC ATGAGATGGA GCCTGTGTTT GCACTTTACA ACCCTTTCTT TTGTGTAATG GATTTGTATC CCCTTCTTCC TGACCTCCCA AAAATTTAAG AAAGAAATAG TTTTGAACTC AGATTTCATT TCATTGGTTT GTTTCGAAAT TAACCAATGT GTTATAGCGG TTCAGTTGCA T |
| Length | 1051 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 5062240.. 5064705 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G13120.1 |
| Description | cyclophilin 20-2 |
| TAIR curator summary | Encodes a lumenal cyclophilin with peptidyl-prolyl isomerase activity that is associated with the NAD(P)H dehydrogenase complex in stromal regions of the thylakoid membrane. It is likely to be important for the accumulation of the hydrophobic domain of the NAD(P)H dehydrogenase complex. This complex is associated with PSI and is responsible for the reduction of plastoquinone. |
| Alias | [ATCYP20-2][CYP20-2][Pnsl5][ARABIDOPSIS THALIANA CYCLOPHILIN 20-2][cyclophilin 20-2][Photosynthetic NDH subcomplex L 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 14.4914 |
Ahg488869 | Mitochondrial substrate carrier family protein |
| 17.5499 |
Ahg311903 | ALBINA 1 |
| 19.6214 |
Ahg484575 | ribosomal protein L12-C |
| 30.1662 |
Ahg493196 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| 36.1801 |
Ahg909580 | Aldolase-type TIM barrel family protein |
| 38 |
Ahg496574 | Regulator of chromosome condensation (RCC1) family protein |
| 40.0999 |
Ahg472217 | Pseudouridine synthase/archaeosine transglycosylase-like family protein |
| 40.5956 |
Ahg902422 | Late embryogenesis abundant protein, group 2 |
| 40.6448 |
Ahg939440 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 42.8135 |
Ahg477055 | vacuolar ATP synthase subunit A |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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