Detail



ID : Ahg488480

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488480|fgenesh2_kg.6__1614__AT5G16290.2
Sequence
TCACCCAAAG TTTCCCTCTT TCTCTCTTCT TCTTCTCTCT GCTGTTTTCC GCCTCACACC ATTACTCTCC CAACAATGGC GGCGACGGCG ACTGCTGCTT CACTATTCCC ATCTTACTTC CAGAATCAGA TTAAAGTTTA TGGCTTTCCG GCGAAAACCC CCAACTCCGT GCAAGTAACT CAAATCATCG ACGGGAGGAA GATGAGAAAT GCCACTGTTC TCTCTGCTGC CTCCACCGAT AAAGCCATCA CCACCGCTCA ATCTGTAGCT GCGACGGCTA GTGATAGAGT AAGGAGGCAT ACCATCTCGG TGTTTGTGGG TGATGAGAGC GGTATAATAA ACCGGATTGC TGGAGTGTTT GCTAGAAGGG GATACAATAT TGAGTCCCTT GCCGTGGGAT TGAATGAAGA CAAGGCTCTG TTTACTATCG TTGTTCTTGG GACAGACAAA GTCTTGCAAC AAGTCGTAGA ACAGCTTAAC AAGCTCGTCA ATGTCATCAA GGTGGAAGAT CTCTCCAAGG AGCCCCATGT AGAACGTGAA TTAATGCTCA TTAAACTTAA CGCTGATCCA AGCACCCGCT CAGAGATCAT GTGGTTGGTG GATATCTTTA GAGCAAAAAT CGTGGATACC TCAGAGCACT CTCTAACGAT TGAGGTAACT GGAGACCCAG GAAAAATGGT TGCACTAACG ACAAACTTAG AGAAGTTTGG AATAAAAGAA ATTGCAAGAA CAGGGAAGAT TGCTCTGAGA CGGGAAAAGA TGGGAGAAAC CGCTCCGTTT TGGAGATTTT CAGCGGCATC ATACCCACAT CTTGTAAAGG AATCATCATC TCATGAAACT GTTGCAGAGA AAACAAAGCT AGCATTGAAT GGAAATGGCA ATGCATCATC GGGGGGTGAC GTTTATCCAG TGGAACCCTA TAATGATTTC AAACCGGTCC TTGACGCTCA TTGGGGAATG GTCTATGACG AAGATTCGAG CGGACTCCGG TCCCACACAT TATCTTTACT TGTGGCCAAC GTTCCCGGTG TTCTCAATCT AATAACTGGA GCTATCTCCA GGAGAGGTTA TAACATCCAG AGTCTAGCTG TTGGTCCTGC TGAGAAAGAG GGCTTATCTC GGATTACAAC AGTTATCCCC GGAACTGATG AAAATATAGA CAAATTGGTT AGGCAGCTCC AGAAGTTGAT TGATCTTCAG GAGATACAAA ATATAACGCA CATGCCATTT GCGGAGCGAG AACTGATGCT CATCAAAGTA GCTGCTGATA CTTCTGCAAG GAGAGATGTT CTCGATATTG CTCAAGTTTT CCGTGCTAAA GCCATTGATG TCTCTGATCA TACTATCACC CTTGAGGTTA CAGGGGATCT TAGAAAAATG TCTGCACTAC AAACGCAGTT AGAGGCCTAT GGACTCTGCG AGGTGGCTAG GACAGGAAGA GTGGCATTGG TAAGAGAATC TGGAGTGGAT TCGACTTATC TTCGTGGATA CTCTCTTCCT TTGTAGTTCC AAAGGTTAGA TGAAAGGATC TTCTTGTGCA GAGGACTTAC CGCAAGCTTC AGTGTACTAG TCAAAAGGAC TGCACATTGT TTTCTGTGAT TGATTGCTTC CTCACGAGCC ATGGCGTTTG GAGTTGTTGT TATAGGAGGA CCTGTTTAGT GAACTAAAAA TAAATAATAA TGTTTGTTCC GTTAGATTAG TTTTGAATAC TTTTCTCAAA TGTAGAACAC TGTT 
Length1734
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6360723.. 6364840
Download Sequence
A.thaliana
AGI-codeAT5G16290.1
DescriptionVALINE-TOLERANT 1
TAIR curator summary
Alias[VAT1][VALINE-TOLERANT 1]
Gene coexpression
MR
MR Locus Description
13.1529 Ahg485932 ABC-2 type transporter family protein
27.1662 Ahg313693 UDP-glucosyl transferase 78D1
33.1813 Ahg481533
33.4664 Ahg488379 myb domain protein 16
36.3318 Ahg487959 overexpressor of cationic peroxidase 3
37.5766 Ahg938592 Leucine-rich repeat protein kinase family protein
39.598 Ahg945614 arginosuccinate synthase family
43.5775 Ahg480375 arabinogalactan protein 9
45.0777 Ahg925945 abscisic acid (aba)-deficient 4
45.6727 Ahg920474 prephenate dehydrogenase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression