Detail



ID : Ahg488691

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488691|fgenesh2_kg.6__1825__AT5G18230.1
Sequence
ATCCATAAAA GATCCAATCA AAATTCATTC ATCCATCCAT CATCGTTAGT TACATACACA TCATCTCCTT CCTCTCGCTC CCTTCTGATA GCGAAACCCT AAAATACTAT CAGCTGCTAC TTTCCGAAAC CAAATTCCGA CGAATTAACT TTTTTTTTGT TTTTTGGATA AAATCATCGG AGTCTCTTCT CTGGTTCGGC TGTGATGGGT GCGAGCCGGA AATTACAAGG CGAGATAGAT CGGGTGCTGA AGAAGGTTCA AGAAGGTGTT GATGTTTTCG ACAGCATCTG GAACAAGATG GGTGCGAGCC GGAAATTACA AGGCGAGATA GATCGGGTGC TGAAGAAGGT TCAAGAAGGT GTTGATGTTT TCGACAGCAT CTGGAACAAG GTATATGATA CAGACAATGT TAACCAAAAG GAAAAGTTCG AGGCGGACTT GAAGAAGGAA ATCAAGAAGC TGCAGCGGTA TAGAGACCAG ATCAAGACTT GGATTCAGTC CAGTGAGATC AAAGATAAGA AAGTCAGTGC ATCATATGAG CAATCCCTGG TTGACGCTCG GAAGCTTATT GAGAAAGAGA TGGAGAGGTT TAAGATCTGT GAGAAAGAGA CCAAGACAAA AGCTTTTTCC AAGGAAGGAC TGGGTCAGCA ACCTAAAACT GACCCAAAAG AGAAAGCAAA GTCAGAGACA AGGGATTGGT TAAACAATGT GGTGAGTGAA CTGGAGTCAC AGATTGATAG CTTTGAAGCT GAATTGGAAG GACTGTCTGT CAAAAAAGGA AAGACAAGAC CGCCCAGATT GACTCATCTT GAGACATCTA TCACAAGGCA CAAGGATCAC ATAATAAAGC TGGAACTGAT CTTGAGGCTT CTGGACAATG ATGAATTAAG TCCAGAACAA GTAAATGACG TCAAAGATTT TCTGGATGAT TATGTTGAAC GAAATCAGGA TGATTTTGAC GAATTCAGTG ATGTCGATGA GCTCTATAGC ACGTTGCCAC TAGATGAGGT GGAGGGTCTT GAAGATCTAG TTACTGCTGG CCCTCTTGTC AAGGGTACTC CTTTGAGCAT GAAGAGTTCT TTGGCAGCGT CAGCATCTCA AGTTCGGAGC ATAAGTTTGC CAACTCATCA TCAGAGTACT TCGCAAGAGA AAACAGAGGA TCCATCTTTA CCGGATAGCA GTGCTGAGAT GGTTCCAAAA ACCCCTCCCC CAAAGAATGG CGCAGGCCTT CACTCAGCAC CATCAACACC TGCCGGGGGA CGTCCAAGTT TGAATGTGCC TGCCAGTAAT ATTTCAAATG CATCAGTTGC CTTATCAACT TCTATTCCTA CTCAAACTTC CATAGAAAGC ATGGGGAGTT TGTCTCCCGT GACTGCCAAG GAAGAAGACG CAACAACATT GCCTTCTCGT AAACCACCCT CATCTGTTGC TGATACTCCA TTGAGGGGCA TTGGTAGAGT TAGTATCCCC AACCAGCCCC AACCAAGCCA GCCTCCGTCT CCAATTCCAG CTAATGGATC TCGCATTAGT GCAACTTCAG CAGCTGAAGT TGCAAAGAGA AATATAATGG GAGTTGAGAG CAATGTCCAA CCTCTAACTT CTCCACTGAG CAAAATGGTA TTGCCACCAA CTGCAAAGGG TAATGATGGA ACTGCCTCTG ATAGTAACCC TGGTGATGTT GCGGCTAGTA TCGGTAGAGC TTTTTCACCA TCTATTGTAT CTGGTTCGCA GTGGAGGCCT GGTAGTCCCT TTCAGAGTCA GAATGAAACG GTTCGTGGGA GAACTGAAAT AGCACCAGAT CAAAGAGAGA AATTTTTACA GAGGTTACAG CAAGTACAGC AAGGCCATGG TAACCTCTTA GGCATGCCTT CTCTATCTGG AGGAAATGAG AAGCAGTTTT CTTCACAACA GCAAAATCCT CTATTACAGC AGAGCTCTGC CATTTCTCCT CATGGAAGCT TGGGAATCGG AGTTCAGGCA CCAGGTTTTA ATGTCATGAA TTCTGCCTCC TTACAGCAGC AGTCAAATGC CATGAGTCAA CAATTGGGTC AGCAGCCTTC TGTTGCAGAT GTAGACCATG TCAGAAATGA TGATCAACCA CAGCAAAACT TACCTGATGA TTCAGCTTCC ATAACAGCTT CAAAAACTAT TCAAAATGAG GATGATTCTA AAGTTCTATT TGATACTCCG TCCGGAATGC CCAGCTACAT GTTGGATACA GTACAGGTAT CTAGCGGTCC TGATTTCTCT CCTGGACAAC CCATACAACC AGGTCAATCT TCAAGTAGCC TTGGGGTCAT TGGCCGGAGA AGTAACTCTG AATTAGGAGC CATTGGTGAC CATTCAGCTG TAGGGCCAAT GCATGATCAA ATGCACAATC TCCAGATGCT TGAAGCTGCT TTCTACAAAC GTCCTCAACC CTCAGATTCA GAACGTCCTA GACCCTATTC TCCGAGGAAC CCAGCAATCA CACCACAAAC ATTTCCCCAA ACACAAGCAC CAATCATAAA CAATCCTTTG CTCTGGGAAC GTTTAGGCAG CGACGCTTAT GGGACGGATA CTTTGTTCTT TGCGTTCTAT TATCAGCAGA ACTCATACCA GCAATATCTA GCGGCAAAAG AGCTGAAGAA ACAGTCATGG AGATACCACA GAAAGTTCAA CACTTGGTTT CAGAGACATA AAGAGCCAAA GATTGCAACC GATGAATATG AACAAGGAGC CTATGTTTAC TTTGATTTCC AAACCCCCAA AGACGAGAAT CAAGAAGGAG GATGGTGTCA GAGGATCAAA AATGAGTTCA CATTTGAATA CAGTTATCTA GAAGATGAAC TCGTCGTATA GAATAGAGAG AGATATACAT GTTTGTATAT ACTCTTGAGC AAGTGTTATT TCCTGCGTCT ATTTTGTACT CTTCTTTTCA ATAAACTAAT TACTTTTAGT TTCAAACAAT AAAAACCAGA GTATCATCAT G 
Length2971
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7214518.. 7220176
Download Sequence
A.thaliana
AGI-codeAT5G18230.2
Descriptiontranscription regulator NOT2/NOT3/NOT5 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3 Ahg476621 plastid transcriptionally active 2
3 Ahg485358 casein kinase II, alpha chain 2
4.89898 Ahg491448 Sec23/Sec24 protein transport family protein
6.16441 Ahg485540 calcium-dependent protein kinase 13
11.4891 Ahg939446 transducin family protein / WD-40 repeat family protein
12.6491 Ahg920619 ubiquitin-specific protease 15
13.7113 Ahg477306 K+ uptake transporter 3
15.4919 Ahg477212 tetratricopeptide repeat (TPR)-containing protein
15.5885 Ahg494787 Chaperone DnaJ-domain superfamily protein
15.7162 Ahg934119 transcription activators
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression